RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 FAM216BQ8N7L0 139 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 GTSF1Q8WW33 167 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
COL9A2-207ENST00000482722 MS4A6AQ9H2W1 248 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 DYSFO75923 2080 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 CEACAM4O75871 244 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 LIPFP07098 398 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 HTR1DP28221 377 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.57
COL9A2-207ENST00000482722 JMJD8Q96S16 334 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 NAA38Q9BRA0 125 aaKnown RBP11.52□□□□□ -0.57
COL9A2-207ENST00000482722 PAXXQ9BUH6 204 aa11.52□□□□□ -0.57
COL9A2-207ENST00000482722 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.57
COL9A2-207ENST00000482722 G3V4G9 280 aa11.51□□□□□ -0.57
COL9A2-207ENST00000482722 F2RL2O00254 374 aa11.51□□□□□ -0.57
COL9A2-207ENST00000482722 PAX2Q02962 417 aa11.51□□□□□ -0.57
COL9A2-207ENST00000482722 COX8AP10176 69 aa11.51□□□□□ -0.57
COL9A2-207ENST00000482722 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
COL9A2-207ENST00000482722 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
COL9A2-207ENST00000482722 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 TMEM97Q5BJF2 176 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 Q6ZS92 163 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
COL9A2-207ENST00000482722 ITPR1Q14643 2758 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 KBTBD11-OT1A0A1B0GTJ5 212 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 BLNKQ8WV28 456 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
COL9A2-207ENST00000482722 E7EUB6 86 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 CSN3P07498 182 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 OR5AL1P0C617 328 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 FAM87AP0C7U9 286 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
COL9A2-207ENST00000482722 TNFAIP6P98066 277 aaPredicted RBP11.5□□□□□ -0.57
COL9A2-207ENST00000482722 RALYQ9UKM9 306 aaKnown RBP11.5□□□□□ -0.57
COL9A2-207ENST00000482722 PRNDQ9UKY0 176 aa11.5□□□□□ -0.57
COL9A2-207ENST00000482722 TANC2Q9HCD6 1990 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 H3BTX0 84 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 RNASE2P10153 161 aaKnown RBP11.49□□□□□ -0.57
COL9A2-207ENST00000482722 SEC11AP67812 179 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 CD69Q07108 199 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 LINC01545Q5VT33 79 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 GTF2H5Q6ZYL4 71 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 TEX45Q8NA69 505 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 FXYD5Q96DB9 178 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 H3BUT2 72 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 PATE2Q6UY27 113 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 C5orf17Q8NAS9 161 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 HSPB8Q9UJY1 196 aa11.49□□□□□ -0.57
COL9A2-207ENST00000482722 UPK2O00526 184 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 CCL8P80075 99 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 C1orf185Q5T7R7 199 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 AP1S3Q96PC3 154 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 C9orf118A6NHY6 69 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 A8MWL6 223 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 NCR2O95944 276 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 MOSP00540 346 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 SLC25A5P05141 298 aaKnown RBP11.48□□□□□ -0.57
COL9A2-207ENST00000482722 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
COL9A2-207ENST00000482722 CT45A6P0DMU7 189 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 CT45A5P0DMU8 189 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 CT45A7P0DMV0 189 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 GLRXP35754 106 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 C10orf55Q5SWW7 151 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 C10orf113Q5VZT2 155 aa11.48□□□□□ -0.57
COL9A2-207ENST00000482722 ANKHD1Q8IWZ3 2542 aaKnown RBP11.48□□□□□ -0.57
COL9A2-207ENST00000482722 CHEK1O14757 476 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 ZNF714Q96N38 554 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 VPS13CQ709C8 3753 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 LHBP01229 141 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 CR1LQ2VPA4 569 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 TMEM177Q53S58 311 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 NPIPB3Q92617 1050 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 NDFIP1Q9BT67 221 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 PRSS22Q9GZN4 317 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 EPDR1Q9UM22 224 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 HILPDAQ9Y5L2 63 aa11.47□□□□□ -0.57
COL9A2-207ENST00000482722 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.57
COL9A2-207ENST00000482722 K7EP34 96 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 P01737 135 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 CGB3P0DN86 165 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 CGB7P0DN87 165 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 MYCNOSP40205 109 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 IGF2-ASQ6U949 168 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 OR1N2Q8NGR9 330 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 GPR82Q96P67 336 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 TIMM23BQ5SRD1 257 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 OR1L8Q8NGR8 309 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 NEU4Q8WWR8 484 aaPredicted RBP11.46□□□□□ -0.57
COL9A2-207ENST00000482722 GAFA1Q96PS6 74 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 MLST8Q9BVC4 326 aa11.46□□□□□ -0.57
COL9A2-207ENST00000482722 MRPL36Q9P0J6 103 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms