RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TBC1D24Q9ULP9 559 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 CELA1Q9UNI1 258 aa7.59□□□□□ -1.19
CPSF4-212ENST00000482251 STRAPQ9Y3F4 350 aaKnown RBP7.59□□□□□ -1.19
CPSF4-212ENST00000482251 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
CPSF4-212ENST00000482251 NAP1L6A6NFF2 107 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 ZNF705EA8MWA4 302 aaPredicted RBP7.58□□□□□ -1.2
CPSF4-212ENST00000482251 F6UB75 175 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 CCNKO75909 580 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 IL7P13232 177 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 HLA-DRB4P13762 266 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 MIFP14174 115 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 ORM2P19652 201 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 RRAS2P62070 204 aaPredicted RBP7.58□□□□□ -1.2
CPSF4-212ENST00000482251 TMEM41BQ5BJD5 291 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 TMEM182Q6ZP80 229 aaPredicted RBP7.58□□□□□ -1.2
CPSF4-212ENST00000482251 Q6ZTC4 211 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 OR8I2Q8N0Y5 310 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 CSNK1G2-AS1Q8NCQ2 148 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 OR1B1Q8NGR6 318 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 SLC25A32Q9H2D1 315 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 PSENENQ9NZ42 101 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 PFDN2Q9UHV9 154 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 HLA-DRB4X5D2U9 266 aa7.58□□□□□ -1.2
CPSF4-212ENST00000482251 IGHV3OR16-12A0A075B7B8 117 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 IGLL5B9A064 214 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 SOCS3O14543 225 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 CCSO14618 274 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 IFNA21P01568 189 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 HLA-DMBP28068 263 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 NKX2-1P43699 371 aaPredicted RBP7.57□□□□□ -1.2
CPSF4-212ENST00000482251 PSMB3P49720 205 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 NUTF2P61970 127 aaKnown RBP7.57□□□□□ -1.2
CPSF4-212ENST00000482251 OR4B1Q8NGF8 309 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 OR4D5Q8NGN0 318 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 C2CD4CQ8TF44 421 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 SCRT1Q9BWW7 348 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 C20orf85Q9H1P6 137 aa7.57□□□□□ -1.2
CPSF4-212ENST00000482251 CENPXA8MT69 81 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 METTL15P1P0C7V9 234 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 PRB4P10163 310 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-212ENST00000482251 ID1P41134 155 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 EMP1P54849 157 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 ID3Q02535 119 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 IAH1Q2TAA2 248 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-212ENST00000482251 C1orf194Q5T5A4 169 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 IGFL4Q6B9Z1 124 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 BPIFCQ8NFQ6 507 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 C16orf92Q96LL3 132 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 TMEM147Q9BVK8 224 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 C1QTNF4Q9BXJ3 329 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 SLC35B3Q9H1N7 401 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 SAV1Q9H4B6 383 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-212ENST00000482251 GSKIPQ9P0R6 139 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 KMT2AQ03164 3969 aa7.56□□□□□ -1.2
CPSF4-212ENST00000482251 TRAV6A0A075B6T7 132 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 ZNF98A6NK75 572 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 GALR1P47211 349 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 FGL1Q08830 312 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 CYP2G1PQ6ZSU1 146 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 ZNF709Q8N972 641 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 RSG1Q9BU20 258 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 HRH4Q9H3N8 390 aa7.55□□□□□ -1.2
CPSF4-212ENST00000482251 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
CPSF4-212ENST00000482251 RCL1Q9Y2P8 373 aaKnown RBP7.55□□□□□ -1.2
CPSF4-212ENST00000482251 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 FAM25EA8MYX2 175 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 H3BRN7 92 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 ISLRO14498 428 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 PLA2G10O15496 165 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 LYRM1O43325 122 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 IL5P05113 134 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 LINC00869P0C866 280 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 PAX9P55771 341 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 PRR20EP86478 221 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 PRR20CP86479 221 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 PRR20DP86480 221 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 PRR20BP86481 221 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 PRR20AP86496 221 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 SLC38A11Q08AI6 406 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 FAM78BQ5VT40 261 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 LGALS9CQ6DKI2 356 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 EBLN2Q6P2I7 272 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 TMEM144Q7Z5S9 345 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 ZBTB8BQ8NAP8 495 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-212ENST00000482251 C17orf77Q96MU5 243 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 UHRF2Q96PU4 802 aa7.54□□□□□ -1.2
CPSF4-212ENST00000482251 C7orf50Q9BRJ6 194 aaKnown RBP7.54□□□□□ -1.2
CPSF4-212ENST00000482251 IGHV4-4A0A075B6R2 117 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 C11orf94C9JXX5 98 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 CFDP00746 253 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-212ENST00000482251 OR5G3P0C626 314 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-212ENST00000482251 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-212ENST00000482251 RAP2BP61225 183 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 C12orf74Q32Q52 190 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms