RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 A0A0G2JQZ4 141 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 LOC100130705A0A1B0GUX0 176 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 J3QRK9 145 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 GSTZ1O43708 216 aaPredicted RBP2.05□□□□□ -2.08
SF3B1-210ENST00000482158 GZMBP10144 247 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 BCL2P10415 239 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 FGF7P21781 194 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 ATP6V0CP27449 155 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 CCR2P41597 374 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 HBA1P69905 142 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 GNA12Q03113 381 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 CAV1Q03135 178 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 FKBP1CQ5VVH2 108 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 Q6Q795 121 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 TEX261Q6UWH6 196 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 C1orf174Q8IYL3 243 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 C8orf59Q8N0T1 100 aaPredicted RBP2.05□□□□□ -2.08
SF3B1-210ENST00000482158 SLC22A24Q8N4F4 322 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 OR52R1Q8NGF1 315 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 TMEM106AQ96A25 262 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 GNPNAT1Q96EK6 184 aaPredicted RBP2.05□□□□□ -2.08
SF3B1-210ENST00000482158 CCL13Q99616 98 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 Q9BRP9 147 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 RTL8AQ9BWD3 113 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 COMMD5Q9GZQ3 224 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 TAF9BQ9HBM6 251 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 LAMTOR3Q9UHA4 124 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 PCTPQ9UKL6 214 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 DISP2A7MBM2 1401 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 MYOM3Q5VTT5 1437 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 FMN1Q68DA7 1419 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 GRIN2AQ12879 1464 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 LOC107984640A0A0U1RRK4 108 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 SPAARA0A1B0GVQ0 90 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 H3BRN7 92 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 GABARAPH6UMI1 98 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 M0R143 59 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 COX7A2LO14548 114 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 CHD1O14646 1710 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 CCL25O15444 150 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 OBSL1O75147 1896 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 DPM2O94777 84 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 UCHL1P09936 223 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 FKBP2P26885 142 aaKnown RBP2.04□□□□□ -2.08
SF3B1-210ENST00000482158 TAS2R20P59543 309 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 NCMAPQ5T1S8 102 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 LYRM7Q5U5X0 104 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 PRR15Q8IV56 129 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 IFT20Q8IY31 132 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 ACBD7Q8N6N7 88 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 TERB2Q8NHR7 220 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 MRPL30Q8TCC3 161 aaKnown RBP2.04□□□□□ -2.08
SF3B1-210ENST00000482158 MS4A6EQ96DS6 147 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 MAGI1Q96QZ7 1491 aaPredicted RBP2.04□□□□□ -2.08
SF3B1-210ENST00000482158 GPX7Q96SL4 187 aaPredicted RBP2.04□□□□□ -2.08
SF3B1-210ENST00000482158 SLC25A21Q9BQT8 299 aaPredicted RBP2.04□□□□□ -2.08
SF3B1-210ENST00000482158 PSMG3Q9BT73 122 aaPredicted RBP2.04□□□□□ -2.08
SF3B1-210ENST00000482158 OR2J1Q9GZK6 312 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 WDR61Q9GZS3 305 aaKnown RBP2.04□□□□□ -2.08
SF3B1-210ENST00000482158 SCN3BQ9NY72 215 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 TVP23BQ9NYZ1 205 aa2.04□□□□□ -2.08
SF3B1-210ENST00000482158 ALPK3Q96L96 1907 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 KIF20BQ96Q89 1820 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 DNMBPQ6XZF7 1577 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 CAMSAP2Q08AD1 1489 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 CECR2Q9BXF3 1484 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 TMEM2Q9UHN6 1383 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 TRAV30A0A087WSZ9 112 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 IGHV3-15A0A0B4J1V0 119 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 TRAV41A0A0B4J266 112 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 MDFIC2A0A1B0GVS7 189 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 DPRXA6NFQ7 191 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 H3BPC8 53 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 LINC00694P0DN24 101 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 COPZ1P61923 177 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 FKBP1AP62942 108 aaKnown RBP2.03□□□□□ -2.08
SF3B1-210ENST00000482158 EIF3IQ13347 325 aaKnown RBP2.03□□□□□ -2.08
SF3B1-210ENST00000482158 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 VMA21Q3ZAQ7 101 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.03□□□□□ -2.08
SF3B1-210ENST00000482158 GLIPR1L1Q6UWM5 242 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 CROCCP2Q86T23 111 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 C4orf33Q8N1A6 199 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 C9orf62Q8N4C0 152 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 TCTEX1D1Q8N7M0 179 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 OR51A4Q8NGJ6 313 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 OR5H6Q8NGV6 325 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 SGMS2Q8NHU3 365 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 SLAMF6Q96DU3 332 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 BORCS8Q96FH0 119 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 ZC2HC1AQ96GY0 325 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 NKX6-2Q9C056 277 aaPredicted RBP2.03□□□□□ -2.08
SF3B1-210ENST00000482158 IMUPQ9GZP8 106 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 BAIAP2Q9UQB8 552 aa2.03□□□□□ -2.08
SF3B1-210ENST00000482158 WDR90Q96KV7 1748 aa2.03□□□□□ -2.09
SF3B1-210ENST00000482158 PIK3C2AO00443 1686 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 QRICH2Q9H0J4 1663 aa2.02□□□□□ -2.09
SF3B1-210ENST00000482158 SYNJ1O43426 1573 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms