RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 OOSP2Q86WS3 158 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 SLC25A29Q8N8R3 303 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 DCANP1Q8TF63 244 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 ZNF382Q96SR6 550 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 PFDN5Q99471 154 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 B9D2Q9BPU9 175 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 TM2D3Q9BRN9 247 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 ANAPC13Q9BS18 74 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 CCDC160A6NGH7 325 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 OR4C45A6NMZ5 311 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 C11orf94C9JXX5 98 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 CRYZL1O95825 349 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 OR10J4P0C629 311 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 RPS4Y1P22090 263 aaKnown RBP2.21□□□□□ -2.06
SMC6-208ENST00000481708 S100A1P23297 94 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 CD200P41217 278 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 TCTAP57738 103 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 SLC38A11Q08AI6 406 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 MPV17L2Q567V2 206 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 TCTEX1D4Q5JR98 221 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 COA6Q5JTJ3 125 aaKnown RBP2.21□□□□□ -2.06
SMC6-208ENST00000481708 FAM182AQ5T1J6 154 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 SMARCD3Q6STE5 483 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 ZNF525Q8N782 197 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 OR4D11Q8NGI4 311 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 C10orf105Q8TEF2 133 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 EXOSC8Q96B26 276 aaKnown RBP2.21□□□□□ -2.06
SMC6-208ENST00000481708 RSL24D1Q9UHA3 163 aaKnown RBP2.21□□□□□ -2.06
SMC6-208ENST00000481708 DNAJC12Q9UKB3 198 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 AMMECR1Q9Y4X0 333 aaPredicted RBP2.21□□□□□ -2.06
SMC6-208ENST00000481708 HSPB11Q9Y547 144 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 MGAM2Q2M2H8 2515 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 MIF4GDA9UHW6 222 aaKnown RBP2.2□□□□□ -2.06
SMC6-208ENST00000481708 BPGMP07738 259 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 OR12D1P0DN82 309 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 CASP1P29466 404 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 INSL3P51460 131 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 HERVK_113P61574 105 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 SYCNQ0VAF6 134 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 ZNF678Q5SXM1 525 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 C20orf196Q8IYI0 205 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 Q8N976 141 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 GDPD1Q8N9F7 314 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 SLC35G5Q96KT7 338 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 GPR82Q96P67 336 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 HSD17B10Q99714 261 aaKnown RBP2.2□□□□□ -2.06
SMC6-208ENST00000481708 MMP26Q9NRE1 261 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 LYRM2Q9NU23 88 aaPredicted RBP2.2□□□□□ -2.06
SMC6-208ENST00000481708 CELA1Q9UNI1 258 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 PRSS21Q9Y6M0 314 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 TRAV4A0A0B4J268 109 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 K7EPK0 472 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 DEDDO75618 318 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 APOMO95445 188 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 PHBP35232 272 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 GABRA2P47869 451 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 Q1RN00 199 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 RNF212Q495C1 297 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 MED12LQ86YW9 2145 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 OR13C8Q8NGS7 320 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 SLC25A40Q8TBP6 338 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 GALMQ96C23 342 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 VGLL1Q99990 258 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 SH3BGRL3Q9H299 93 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 SEC16AO15027 2179 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 COPEO14579 308 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 INSP01308 110 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 COX6B1P14854 86 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 SLC25A16P16260 332 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 CRYBB3P26998 211 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 OR8B8Q15620 311 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 ATP6AP1LQ52LC2 224 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 UBE2NLQ5JXB2 153 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 LHFPL1Q86WI0 220 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 NR2C2APQ86WQ0 139 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 DYDC1Q8WWB3 177 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 C2orf88Q9BSF0 95 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 TTTY12Q9BZ98 90 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 TMEM216Q9P0N5 145 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 UNC13CQ8NB66 2214 aa2.2□□□□□ -2.06
SMC6-208ENST00000481708 DLEU1O43261 78 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 FKBP2P26885 142 aaKnown RBP2.19□□□□□ -2.06
SMC6-208ENST00000481708 KRTAP10-11P60412 298 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 TBPL1P62380 186 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 GNB2P62879 340 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 DNLZQ5SXM8 178 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 CNBD2Q96M20 576 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 CCL13Q99616 98 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 HDHD3Q9BSH5 251 aaPredicted RBP2.19□□□□□ -2.06
SMC6-208ENST00000481708 LINC00574Q9H8X3 128 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 B4DEV8 164 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 TRAPPC2LH3BP13 241 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 APOC4-APOC2K7ER74 178 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 APOC2P02655 101 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 ZNF80P51504 273 aaPredicted RBP2.19□□□□□ -2.06
SMC6-208ENST00000481708 KLF3P57682 345 aaPredicted RBP2.19□□□□□ -2.06
SMC6-208ENST00000481708 CDC42P60953 191 aa2.19□□□□□ -2.06
SMC6-208ENST00000481708 ATP5G2Q06055 141 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms