RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 KCNIP3Q9Y2W7 256 aa4.5□□□□□ -1.69
VPS50-215ENST00000480943 ALMS1Q8TCU4 4167 aa4.5□□□□□ -1.69
VPS50-215ENST00000480943 DNASE2O00115 360 aaPredicted RBP4.49□□□□□ -1.69
VPS50-215ENST00000480943 SCGB2A1O75556 95 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 DFFBO76075 338 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 SULT1A3P0DMM9 295 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 SULT1A4P0DMN0 295 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 NPY1RP25929 384 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 BMI1P35226 326 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 RND2P52198 227 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 SUPT4H1P63272 117 aaKnown RBP4.49□□□□□ -1.69
VPS50-215ENST00000480943 ZNF79Q15937 498 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 AARDQ4LEZ3 155 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 C2orf83Q53S99 150 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 TMED4Q7Z7H5 227 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 TOMM5Q8N4H5 51 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 OR4X1Q8NH49 305 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 OR52E5Q8NH55 327 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 TMED6Q8WW62 240 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 IL22RA2Q969J5 263 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 SOSTQ9BQB4 213 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 VSIRQ9H7M9 311 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 RABAC1Q9UI14 185 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 TMEM56-RWDD3S4R434 201 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 V9GYH0 126 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 HYDINQ4G0P3 5121 aa4.49□□□□□ -1.69
VPS50-215ENST00000480943 TRAV30A0A087WSZ9 112 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 A0A0B4J2A0 478 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 KIR2DL5BA0A0G2JN68 375 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 KIR2DL5BA0A0G2JPC4 375 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 A0A0J9YWU9 116 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 A0A1W2PS18 150 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 PRSS47A8MTI9 375 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 UBE2CO00762 179 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 IFNA10P01566 189 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 SLC25A4P12235 298 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 ANXA3P12429 323 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 NPPCP23582 126 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 S100A5P33763 92 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 P2RY1P47900 373 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 CCR6P51684 374 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 CMC4P56277 68 aaPredicted RBP4.48□□□□□ -1.69
VPS50-215ENST00000480943 AP3S2P59780 193 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 DEFB131AP59861 70 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 PAFAH1B2P68402 229 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 SRPXP78539 464 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 EWSR1Q01844 656 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS50-215ENST00000480943 TNFRSF9Q07011 255 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 SMCO1Q147U7 214 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 NMSQ5H8A3 153 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 LEMD1Q68G75 181 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 PRSS54Q6PEW0 395 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 LYZL2Q7Z4W2 148 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 LYG2Q86SG7 212 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 KIR2DL5AQ8N109 375 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 LGI3Q8N145 548 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 FAM24BQ8N5W8 94 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 STXBP6Q8NFX7 210 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 OR1S2Q8NGQ3 325 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 OR1S1Q8NH92 325 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 KIR2DL5BQ8NHK3 375 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 RNASEH2CQ8TDP1 164 aaKnown RBP4.48□□□□□ -1.69
VPS50-215ENST00000480943 DTD1Q8TEA8 209 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 RNF183Q96D59 192 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 NARS2Q96I59 477 aaKnown RBP4.48□□□□□ -1.69
VPS50-215ENST00000480943 METTL26Q96S19 204 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 MS4A6AQ9H2W1 248 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 RBKSQ9H477 322 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 TMEM231Q9H6L2 316 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 SHPKQ9UHJ6 478 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 TP53TG1Q9Y2A0 90 aa4.48□□□□□ -1.69
VPS50-215ENST00000480943 DNAH1Q9P2D7 4330 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 IGHV4-28A0A0C4DH34 117 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 MPTX1A8MV57 137 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 IGKV1-17P01599 117 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 IL4P05112 153 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 CD5P06127 495 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 IGLC1P0CG04 106 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 CRYBB3P26998 211 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 OR10J1P30954 320 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 TMEM128Q5BJH2 165 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 ETFRF1Q6IPR1 90 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 NOXA1Q86UR1 476 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 ACY3Q96HD9 319 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 CSTL1Q9H114 145 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 HSPB7Q9UBY9 170 aa4.47□□□□□ -1.69
VPS50-215ENST00000480943 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.7
VPS50-215ENST00000480943 TRAV2A0A0B4J234 112 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 A0A1B0GUV1 79 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 DUXBA0A1W2PPF3 345 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 K7EQG2 157 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 CA1P00915 261 aaPredicted RBP4.46□□□□□ -1.7
VPS50-215ENST00000480943 IFNA4P05014 189 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 HOXB5P09067 269 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 ZNF688P0C7X2 276 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 IAPPP10997 89 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms