RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 METTL26Q96S19 204 aa6.72□□□□□ -1.33
DDX56-211ENST00000479602 SPAG8Q99932 426 aaPredicted RBP6.72□□□□□ -1.33
DDX56-211ENST00000479602 PSMG3Q9BT73 122 aaPredicted RBP6.72□□□□□ -1.33
DDX56-211ENST00000479602 GGTLC1Q9BX51 225 aa6.72□□□□□ -1.33
DDX56-211ENST00000479602 NPCDR1Q9BY65 106 aa6.72□□□□□ -1.33
DDX56-211ENST00000479602 WDR61Q9GZS3 305 aaKnown RBP6.72□□□□□ -1.33
DDX56-211ENST00000479602 ARV1Q9H2C2 271 aa6.72□□□□□ -1.33
DDX56-211ENST00000479602 FBXL17Q9UF56 701 aa6.72□□□□□ -1.33
DDX56-211ENST00000479602 SMPXQ9UHP9 88 aa6.72□□□□□ -1.33
DDX56-211ENST00000479602 PUS1Q9Y606 427 aaKnown RBP eCLIP6.72□□□□□ -1.33
DDX56-211ENST00000479602 A0A1B0GVG6 124 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 TSPAN4O14817 238 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 AGPAT2O15120 278 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 BUB3O43684 328 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 HNRNPCP07910 306 aaKnown RBP eCLIP6.71□□□□□ -1.34
DDX56-211ENST00000479602 FOLR2P14207 255 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 C4BPBP20851 252 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 SERF2P84101 59 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 NHLH2Q02577 135 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 TIGITQ495A1 244 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 Q5BKY6 102 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 CASC10Q5T4H9 136 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 FAM90A2PQ658T7 463 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 LCN12Q6JVE5 192 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 BTNL8Q6UX41 500 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 GATAD1Q8WUU5 269 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 PFDN5Q99471 154 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 RNF2Q99496 336 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 MGST2Q99735 147 aa6.71□□□□□ -1.34
DDX56-211ENST00000479602 IGHV3-21A0A0B4J1V1 117 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 A8MZ25 164 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 C17orf112F2Z3M2 114 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 JTBO76095 146 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 IGHV3-23P01764 117 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 IL4P05112 153 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 NPPCP23582 126 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 CAMLGP49069 296 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 AP2S1P53680 142 aaPredicted RBP6.7□□□□□ -1.34
DDX56-211ENST00000479602 ZNF90Q03938 601 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 USF2Q15853 346 aaPredicted RBP6.7□□□□□ -1.34
DDX56-211ENST00000479602 DEFB114Q30KQ6 69 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 Q8N1Y9 231 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 TMEM217Q8N7C4 229 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 STOML3Q8TAV4 291 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 GLMPQ8WWB7 406 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 GNPNAT1Q96EK6 184 aaPredicted RBP6.7□□□□□ -1.34
DDX56-211ENST00000479602 GRAMD2BQ96HH9 432 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 NARS2Q96I59 477 aaKnown RBP6.7□□□□□ -1.34
DDX56-211ENST00000479602 ASCL2Q99929 193 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 RABAC1Q9UI14 185 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 SMAD5-AS1Q9Y6J3 95 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 S4R3C0 116 aa6.7□□□□□ -1.34
DDX56-211ENST00000479602 UBE2L5PA0A1B0GUS4 154 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 HELTA6NFD8 242 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 H3BRN7 92 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 CHEK1O14757 476 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 IFNA5P01569 189 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 IGHV3-48P01763 117 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 LINC00869P0C866 280 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 CXCL2P19875 107 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 EIF5AP63241 154 aaKnown RBP6.69□□□□□ -1.34
DDX56-211ENST00000479602 LAMTOR1Q6IAA8 161 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 C16orf54Q6UWD8 224 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 Q6ZRG5 221 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 STPG3Q8N7X2 389 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 OR11H4Q8NGC9 324 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 OR1L4Q8NGR5 311 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 MUC7Q8TAX7 377 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 SHANK2-AS3Q9BTD1 123 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 MRPL32Q9BYC8 188 aaKnown RBP6.69□□□□□ -1.34
DDX56-211ENST00000479602 MFFQ9GZY8 342 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 C19orf73Q9NVV2 129 aa6.69□□□□□ -1.34
DDX56-211ENST00000479602 PAIP2BQ9ULR5 123 aaKnown RBP6.69□□□□□ -1.34
DDX56-211ENST00000479602 FXYD6-FXYD2A0A087WZ82 144 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 A0A087X0K7 114 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 ZNF253O75346 499 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 HYPMO75409 117 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 SAP30O75446 220 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 MBP02144 154 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 OR5G3P0C626 314 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 CMC4P56277 68 aaPredicted RBP6.68□□□□□ -1.34
DDX56-211ENST00000479602 B2MP61769 119 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 ZFP69Q49AA0 526 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 TM4SF20Q53R12 229 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 TM2D3Q9BRN9 247 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 RHPN1-AS1Q9BWJ2 59 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 SLC39A9Q9NUM3 307 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 CLEC5AQ9NY25 188 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 MLXQ9UH92 298 aa6.68□□□□□ -1.34
DDX56-211ENST00000479602 BORCS7-ASMTA0A0B4J1R7 106 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 ZNF320A2RRD8 509 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 SMCO3A2RU48 225 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 ARPC5O15511 151 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 BCL2L11O43521 198 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 FRMD6-AS1P0C7T7 363 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 RPL7P18124 248 aaKnown RBP6.67□□□□□ -1.34
DDX56-211ENST00000479602 FGF7P21781 194 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 PDE6HQ13956 83 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 CLINT1Q14677 625 aa6.67□□□□□ -1.34
DDX56-211ENST00000479602 TMEM61Q8N0U2 210 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms