RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 NMNAT1Q9HAN9 279 aaPredicted RBP0.84□□□□□ -2.27
CCDC58-204ENST00000479414 ENY2Q9NPA8 101 aa0.84□□□□□ -2.27
CCDC58-204ENST00000479414 CHD3Q12873 2000 aaKnown RBP0.84□□□□□ -2.28
CCDC58-204ENST00000479414 DOCK4Q8N1I0 1966 aa0.83□□□□□ -2.28
CCDC58-204ENST00000479414 TRBV19A0A075B6N1 114 aa0.83□□□□□ -2.28
CCDC58-204ENST00000479414 TRBV6-4A0A1B0GX49 114 aa0.83□□□□□ -2.28
CCDC58-204ENST00000479414 TCRBV4S1A1TA0A5B7 111 aa0.83□□□□□ -2.28
CCDC58-204ENST00000479414 ROMO1P60602 79 aa0.83□□□□□ -2.28
CCDC58-204ENST00000479414 FADDQ13158 208 aa0.83□□□□□ -2.28
CCDC58-204ENST00000479414 ITFG2Q969R8 447 aa0.83□□□□□ -2.28
CCDC58-204ENST00000479414 ZFC3H1O60293 1989 aaKnown RBP0.83□□□□□ -2.28
CCDC58-204ENST00000479414 PEAK1Q9H792 1746 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 M0R378 163 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 TAX1BP3O14907 124 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 NDUFB3O43676 98 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 SPA17Q15506 151 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 GOLT1AQ6ZVE7 132 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 SBSPONQ8IVN8 264 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 ST6GALNAC3Q8NDV1 305 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 C4orf3Q8WVX3 66 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 BTF3L4Q96K17 158 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 C9orf16Q9BUW7 83 aa0.82□□□□□ -2.28
CCDC58-204ENST00000479414 MYO18AQ92614 2054 aaKnown RBP0.82□□□□□ -2.28
CCDC58-204ENST00000479414 FMN1Q68DA7 1419 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 PSG9Q00887 426 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 C22orf39Q6P5X5 142 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 OR10K1Q8NGX5 313 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 OR10X1Q8NGY0 326 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 TMEM254Q8TBM7 123 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 GPER1Q99527 375 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 OPTCQ9UBM4 332 aa0.81□□□□□ -2.28
CCDC58-204ENST00000479414 MYO5AQ9Y4I1 1855 aaKnown RBP0.8□□□□□ -2.28
CCDC58-204ENST00000479414 NCR3O14931 201 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 HMGB3O15347 200 aaKnown RBP0.8□□□□□ -2.28
CCDC58-204ENST00000479414 CST8O60676 142 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 S100A6P06703 90 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 CD2P06729 351 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 EFNA4P52798 201 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 REEP5Q00765 189 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 TAF1AQ15573 450 aaPredicted RBP0.8□□□□□ -2.28
CCDC58-204ENST00000479414 FAM74A1Q5RGS3 127 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 EXOC3-AS1Q8N2X6 119 aa0.8□□□□□ -2.28
CCDC58-204ENST00000479414 SLC25A21Q9BQT8 299 aaPredicted RBP0.8□□□□□ -2.28
CCDC58-204ENST00000479414 ASCC3Q8N3C0 2202 aaKnown RBP0.8□□□□□ -2.28
CCDC58-204ENST00000479414 UNC79Q9P2D8 2635 aa0.79□□□□□ -2.28
CCDC58-204ENST00000479414 TRGV10A0A0A0MS01 117 aa0.79□□□□□ -2.28
CCDC58-204ENST00000479414 TMEM256-PLSCR3K7ERE1 68 aa0.79□□□□□ -2.28
CCDC58-204ENST00000479414 SERPINA1P01009 418 aa0.79□□□□□ -2.28
CCDC58-204ENST00000479414 C1QBP02746 253 aa0.79□□□□□ -2.28
CCDC58-204ENST00000479414 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
CCDC58-204ENST00000479414 CITO14578 2027 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 IGHV1-58A0A0C4DH39 117 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 E2F6O75461 281 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 HSD11B1P28845 292 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 HOXA6P31267 233 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 CAPZBP47756 277 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 LINC00322Q6ZN03 302 aaPredicted RBP0.78□□□□□ -2.28
CCDC58-204ENST00000479414 Q8TAT8 98 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 LINC00052Q96N35 136 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 TMEM70Q9BUB7 260 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 PCTPQ9UKL6 214 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 ARL2BPQ9Y2Y0 163 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 ARHGEF11O15085 1522 aa0.78□□□□□ -2.28
CCDC58-204ENST00000479414 TLCD2A6NGC4 264 aa0.77□□□□□ -2.29
CCDC58-204ENST00000479414 A8MWV9 139 aa0.77□□□□□ -2.29
CCDC58-204ENST00000479414 C1orf134Q5TEV5 83 aa0.77□□□□□ -2.29
CCDC58-204ENST00000479414 ZNF833PQ6ZTB9 187 aa0.77□□□□□ -2.29
CCDC58-204ENST00000479414 IMUPQ9GZP8 106 aa0.77□□□□□ -2.29
CCDC58-204ENST00000479414 ARMC1Q9NVT9 282 aa0.77□□□□□ -2.29
CCDC58-204ENST00000479414 MED29Q9NX70 200 aa0.77□□□□□ -2.29
CCDC58-204ENST00000479414 TET1Q8NFU7 2136 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 TMEM210A6NLX4 147 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 NUPR1O60356 82 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 HSPE1P61604 102 aaKnown RBP0.76□□□□□ -2.29
CCDC58-204ENST00000479414 UBE2BP63146 152 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 KRTAP26-1Q6PEX3 210 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 YPEL2Q96QA6 119 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 PSTPIP2Q9H939 334 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 TMEM14CQ9P0S9 112 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 ZNF462Q96JM2 2506 aa0.76□□□□□ -2.29
CCDC58-204ENST00000479414 TRAV10A0A0B4J240 114 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 IFNA7P01567 189 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 IGLV1-51P01701 117 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 AKIRIN2Q53H80 203 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 BCL2L15Q5TBC7 163 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 OR5D14Q8NGL3 314 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 TP53RKQ96S44 253 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 LINC00467Q9BRT7 94 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 ORMDL1Q9P0S3 153 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 NUP98P52948 1817 aa0.75□□□□□ -2.29
CCDC58-204ENST00000479414 PHRF1Q9P1Y6 1649 aaKnown RBP0.75□□□□□ -2.29
CCDC58-204ENST00000479414 MIA2Q96PC5 1412 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 ADGRL3Q9HAR2 1447 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 PTPRFP10586 1907 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 E7EUB6 86 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 DYNLT3P51808 116 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 DSCR4P56555 118 aaPredicted RBP0.74□□□□□ -2.29
CCDC58-204ENST00000479414 NCALDP61601 193 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 PATE2Q6UY27 113 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 GKN2Q86XP6 184 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms