RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 RMND5BQ96G75 393 aaPredicted RBP1.29□□□□□ -2.2
VLDLR-204ENST00000478776 LINC00467Q9BRT7 94 aa1.29□□□□□ -2.2
VLDLR-204ENST00000478776 LRTM1Q9HBL6 345 aa1.29□□□□□ -2.2
VLDLR-204ENST00000478776 MED11Q9P086 117 aa1.29□□□□□ -2.2
VLDLR-204ENST00000478776 NUBP2Q9Y5Y2 271 aa1.29□□□□□ -2.2
VLDLR-204ENST00000478776 COL11A1P12107 1806 aaPredicted RBP1.29□□□□□ -2.2
VLDLR-204ENST00000478776 NUMA1Q14980 2115 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 ICE1Q9Y2F5 2266 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 TRAV5A0A0B4J249 113 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 FAM107AO95990 144 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 HLA-EP13747 358 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 AKR1C3P42330 323 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 ZNF846Q147U1 533 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 ALX1Q15699 326 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 RTL8BQ17RB0 113 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 Q1T7F1 81 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 FKBP1CQ5VVH2 108 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 SAMD13Q5VXD3 122 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 SOSTDC1Q6X4U4 206 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 CROCCP2Q86T23 111 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 PRR15Q8IV56 129 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 IFT20Q8IY31 132 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 LINC00471Q8N535 108 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 THEM6Q8WUY1 208 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 ISOC1Q96CN7 298 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 EFCAB11Q9BUY7 163 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 NPCDR1Q9BY65 106 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 POPDC3Q9HBV1 291 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 BCL2L10Q9HD36 194 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 GINS2Q9Y248 185 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 HS3ST2Q9Y278 367 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 HSPB11Q9Y547 144 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 TECPR2O15040 1411 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 TRPM1Q7Z4N2 1603 aa1.28□□□□□ -2.2
VLDLR-204ENST00000478776 MDC1Q14676 2089 aaKnown RBP1.28□□□□□ -2.2
VLDLR-204ENST00000478776 ZFHX2Q9C0A1 2572 aaPredicted RBP1.27□□□□□ -2.21
VLDLR-204ENST00000478776 CUL9Q8IWT3 2517 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 NUP98P52948 1817 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 PIK3C2AO00443 1686 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 CEP164Q9UPV0 1460 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 TRDV1A0A1B0GX56 115 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 A8MWV9 139 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 TIMM17BO60830 172 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 GPX2P18283 190 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 RHOGP84095 191 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 SURF2Q15527 256 aaPredicted RBP1.27□□□□□ -2.21
VLDLR-204ENST00000478776 ESRGQ1W209 222 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 EIF5AL1Q6IS14 154 aaKnown RBP1.27□□□□□ -2.21
VLDLR-204ENST00000478776 OR9Q1Q8NGQ5 310 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 GRPEL2Q8TAA5 225 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 SLC25A21Q9BQT8 299 aaPredicted RBP1.27□□□□□ -2.21
VLDLR-204ENST00000478776 SLC50A1Q9BRV3 221 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 ADAT1Q9BUB4 502 aaKnown RBP1.27□□□□□ -2.21
VLDLR-204ENST00000478776 LAMTOR2Q9Y2Q5 125 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 EML6Q6ZMW3 1958 aa1.27□□□□□ -2.21
VLDLR-204ENST00000478776 TAF1LQ8IZX4 1826 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 VWDEQ8N2E2 1590 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 PRRC2BQ5JSZ5 2229 aaKnown RBP1.26□□□□□ -2.21
VLDLR-204ENST00000478776 TRAV1-1A0A0B4J248 108 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 PROSCO94903 275 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 CXCL1P09341 107 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 UBBP0CG47 229 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 BCL2P10415 239 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 MGST1P10620 155 aaKnown RBP1.26□□□□□ -2.21
VLDLR-204ENST00000478776 DEFB103AP81534 67 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 PHF5AQ7RTV0 110 aaKnown RBP1.26□□□□□ -2.21
VLDLR-204ENST00000478776 C12orf29Q8N999 325 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 BORCS8Q96FH0 119 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 CARD19Q96LW7 228 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 OR2H1Q9GZK4 316 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 C14orf132Q9NPU4 83 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 SPANXA1Q9NS26 97 aa1.26□□□□□ -2.21
VLDLR-204ENST00000478776 COL5A3P25940 1745 aaPredicted RBP1.26□□□□□ -2.21
VLDLR-204ENST00000478776 TRAV3A0A0B4J244 114 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 LOC105371267A0A1B0GV96 52 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 H7BYZ3 331 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 HIST1H2BKO60814 126 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 CST7O76096 145 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 UBL3O95164 117 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 GADD45GO95257 159 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 IFNA4P05014 189 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 HIST1H2BJP06899 126 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 ASAH2BP0C7U1 165 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 SCGB1A1P11684 91 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 SSR2P43308 183 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 POLR2HP52434 150 aaKnown RBP1.25□□□□□ -2.21
VLDLR-204ENST00000478776 TMBIM6P55061 237 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 ARPP19P56211 112 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 EIF3IQ13347 325 aaKnown RBP1.25□□□□□ -2.21
VLDLR-204ENST00000478776 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 PATE2Q6UY27 113 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 Q6ZRN7 208 aaPredicted RBP1.25□□□□□ -2.21
VLDLR-204ENST00000478776 COA5Q86WW8 74 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 Q8IYB0 196 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 LINC00301Q8NCQ3 95 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 ZNF418Q8TF45 676 aaPredicted RBP1.25□□□□□ -2.21
VLDLR-204ENST00000478776 CCDC115Q96NT0 180 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 BATF3Q9NR55 127 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 OTORQ9NRC9 128 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 RNF11Q9Y3C5 154 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms