RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ATMQ13315 3056 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 IGHV2-26A0A0B4J1V2 119 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 E7EQL1 145 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 TCRAP04437 139 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 NTF3P20783 257 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 FAM19A2Q8N3H0 131 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 OTORQ9NRC9 128 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 HIGD1AQ9Y241 93 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 TRBV6-1A0A0K0K1D8 114 aa14.44□□□□□ -0.1
CCM2-209ENST00000477605 B9A039 149 aa14.44□□□□□ -0.1
CCM2-209ENST00000477605 APOBEC3AP31941 199 aaPredicted RBP14.44□□□□□ -0.1
CCM2-209ENST00000477605 PPP1R27Q86WC6 154 aa14.44□□□□□ -0.1
CCM2-209ENST00000477605 Q9H3A6 140 aa14.44□□□□□ -0.1
CCM2-209ENST00000477605 INSIG2Q9Y5U4 225 aa14.44□□□□□ -0.1
CCM2-209ENST00000477605 DLEU1O43261 78 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 P01737 135 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 DMRTA1Q5VZB9 504 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 OR8B3Q8NGG8 313 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 OR8B2Q96RD0 313 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 CLEC7AQ9BXN2 247 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 RNF24Q9Y225 148 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 IGHV3-72A0A0B4J1Y9 119 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 IGHV1-3A0A0C4DH29 117 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 FAM181BA6NEQ2 426 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 TEX22C9J3V5 150 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 BUB1B-PAK6H3BSN5 160 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 M0R2Z0 102 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 G0S2P27469 103 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 DAZAP1Q96EP5 407 aaKnown RBP14.43□□□□□ -0.1
CCM2-209ENST00000477605 TMEM208Q9BTX3 173 aa14.43□□□□□ -0.1
CCM2-209ENST00000477605 ATRXP46100 2492 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 VWC2LB2RUY7 222 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 BTF3P20290 206 aaKnown RBP14.42□□□□□ -0.1
CCM2-209ENST00000477605 RBPJQ06330 500 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 RUSC1-AS1Q66K80 236 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 ABHD17AQ96GS6 310 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 LPAR2Q9HBW0 351 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 NPIPB6E9PJ23 425 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 FAM87AP0C7U9 286 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 CAMPP49913 170 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 RBPMS2Q6ZRY4 209 aaKnown RBP14.42□□□□□ -0.1
CCM2-209ENST00000477605 CHCHD1Q96BP2 118 aaKnown RBP14.42□□□□□ -0.1
CCM2-209ENST00000477605 C1RLQ9NZP8 487 aa14.42□□□□□ -0.1
CCM2-209ENST00000477605 IGLC1P0CG04 106 aa14.41□□□□□ -0.1
CCM2-209ENST00000477605 TXN2Q99757 166 aa14.41□□□□□ -0.1
CCM2-209ENST00000477605 PLCE1Q9P212 2302 aa14.41□□□□□ -0.1
CCM2-209ENST00000477605 SVILO95425 2214 aa14.4□□□□□ -0.1
CCM2-209ENST00000477605 Q8NA96 180 aa14.4□□□□□ -0.1
CCM2-209ENST00000477605 TRAV9-2A0A087WT02 112 aa14.4□□□□□ -0.1
CCM2-209ENST00000477605 HOXB4P17483 251 aaPredicted RBP14.4□□□□□ -0.1
CCM2-209ENST00000477605 CNTFRP26992 372 aa14.4□□□□□ -0.1
CCM2-209ENST00000477605 HNRNPA3P51991 378 aaKnown RBP14.4□□□□□ -0.1
CCM2-209ENST00000477605 RNASEKQ6P5S7 137 aaKnown RBP14.4□□□□□ -0.1
CCM2-209ENST00000477605 Q6ZN92 141 aa14.4□□□□□ -0.1
CCM2-209ENST00000477605 TCF24Q7RTU0 167 aa14.4□□□□□ -0.1
CCM2-209ENST00000477605 SSBP4Q9BWG4 385 aaPredicted RBP14.4□□□□□ -0.1
CCM2-209ENST00000477605 MRPS16Q9Y3D3 137 aaKnown RBP14.4□□□□□ -0.1
CCM2-209ENST00000477605 I3L2K1 104 aa14.39□□□□□ -0.11
CCM2-209ENST00000477605 PSG1P11464 419 aa14.39□□□□□ -0.11
CCM2-209ENST00000477605 GPR6P46095 362 aaPredicted RBP14.39□□□□□ -0.11
CCM2-209ENST00000477605 ASPHD1Q5U4P2 390 aa14.39□□□□□ -0.11
CCM2-209ENST00000477605 LINC00322Q6ZN03 302 aaPredicted RBP14.39□□□□□ -0.11
CCM2-209ENST00000477605 OR2D3Q8NGH3 330 aa14.39□□□□□ -0.11
CCM2-209ENST00000477605 SLC25A39Q9BZJ4 359 aaPredicted RBP14.39□□□□□ -0.11
CCM2-209ENST00000477605 RPH3ALQ9UNE2 315 aa14.39□□□□□ -0.11
CCM2-209ENST00000477605 GOLT1BQ9Y3E0 138 aa14.39□□□□□ -0.11
CCM2-209ENST00000477605 C2orf70A6NJV1 201 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 PRB1P04280 392 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 CD3EP07766 207 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 LINC00614P0C842 121 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 FOXA3P55318 350 aaPredicted RBP14.38□□□□□ -0.11
CCM2-209ENST00000477605 EBLN2Q6P2I7 272 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 C16orf54Q6UWD8 224 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 Q86TA4 180 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 GTSF1Q8WW33 167 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 SRSF12Q8WXF0 261 aaKnown RBP14.38□□□□□ -0.11
CCM2-209ENST00000477605 NDFIP1Q9BT67 221 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 LYPD1Q8N2G4 141 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 RPEQ96AT9 228 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 RASL11BQ9BPW5 248 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 WNT10AQ9GZT5 417 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 LAMTOR2Q9Y2Q5 125 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 KALRNO60229 2985 aa14.38□□□□□ -0.11
CCM2-209ENST00000477605 PIEZO2Q9H5I5 2752 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 LY6LH3BQJ8 138 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 HAX1O00165 279 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 LYZP61626 148 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 BATFQ16520 125 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 SGK494Q96LW2 274 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 SH3BGRL2Q9UJC5 107 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 ZFP30Q9Y2G7 519 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 CRXO43186 299 aaPredicted RBP14.37□□□□□ -0.11
CCM2-209ENST00000477605 TMEM70Q9BUB7 260 aa14.37□□□□□ -0.11
CCM2-209ENST00000477605 PPIAL4CA0A0B4J2A2 164 aa14.36□□□□□ -0.11
CCM2-209ENST00000477605 OR5AL1P0C617 328 aa14.36□□□□□ -0.11
CCM2-209ENST00000477605 PPIAL4GP0DN37 164 aa14.36□□□□□ -0.11
CCM2-209ENST00000477605 LY6DQ14210 128 aa14.36□□□□□ -0.11
CCM2-209ENST00000477605 URB1-AS1Q96HZ7 61 aa14.36□□□□□ -0.11
CCM2-209ENST00000477605 PGLYRP4Q96LB8 373 aa14.36□□□□□ -0.11
CCM2-209ENST00000477605 FBXL15Q9H469 300 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms