RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 PRADC1Q9BSG0 188 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 PSMG3Q9BT73 122 aaPredicted RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 EFCAB1Q9HAE3 211 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 BOKQ9UMX3 212 aaPredicted RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 COQ4Q9Y3A0 265 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 WASHC3Q9Y3C0 194 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 MYH1P12882 1939 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 MYH8P13535 1937 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 ZFC3H1O60293 1989 aaKnown RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 ADGBQ8N7X0 1667 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 DISP2A7MBM2 1401 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 EEA1Q15075 1411 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 PRG4Q92954 1404 aaPredicted RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 ADGRL2O95490 1459 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 CCDC141Q6ZP82 1450 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 ADGRB3O60242 1522 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 ABCA10Q8WWZ4 1543 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SCN9AQ15858 1988 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 MICAL3Q7RTP6 2002 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 ZC3H13Q5T200 1668 aaKnown RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 QRICH2Q9H0J4 1663 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TRAV4A0A0B4J268 109 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 A0A1B0GV50 99 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TRDV1A0A1B0GX56 115 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 C5orf49A4QMS7 147 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TMEM212A6NML5 194 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 IFITM5A6NNB3 132 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 RIIAD1A6NNX1 92 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 ODF3BA8MYP8 253 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 C1orf196B1AJZ1 125 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 FNDC10F2Z333 226 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 GABARAPH6UMI1 98 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 UBFD1O14562 309 aaKnown RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 NPFFO15130 113 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 HLA-DQB2P05538 268 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SCTP09683 121 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 IGLC6P0CF74 106 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SMIM17P0DL12 118 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 RPS4Y1P22090 263 aaKnown RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 GADD45AP24522 165 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 FKBP2P26885 142 aaKnown RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 LPAR6P43657 344 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 GNG4P50150 75 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 NDUFA6P56556 154 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 C1QTNF8P60827 252 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 FABP5Q01469 135 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 GNA12Q03113 381 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 HSD52Q0P140 79 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 FABP9Q0Z7S8 132 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 BATFQ16520 125 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 Q5BKY6 102 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 BCL2L15Q5TBC7 163 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 LYRM7Q5U5X0 104 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TMEM244Q5VVB8 128 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 FKBP1CQ5VVH2 108 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 RPL22L1Q6P5R6 122 aaKnown RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 SBSNQ6UWP8 590 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TMEM14EPQ6UXP3 125 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 LHFPL1Q86WI0 220 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 GKN2Q86XP6 184 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TCTE3Q8IZS6 198 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SLC22A24Q8N4F4 322 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 YIPF7Q8N8F6 280 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TMEM75Q8N9X5 138 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 C5orf17Q8NAS9 161 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 OR51T1Q8NGJ9 327 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 OR2T27Q8NH04 317 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SLC25A40Q8TBP6 338 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 PP6455Q8WZ26 134 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TMEM106AQ96A25 262 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SLAMF6Q96DU3 332 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 MALSU1Q96EH3 234 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TEX37Q96LM6 180 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 LINC00052Q96N35 136 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 PBOV1Q9GZY1 135 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 Q9H521 79 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 CXorf21Q9HAI6 301 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 CBLN4Q9NTU7 201 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SPANXCQ9NY87 97 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 NAT8Q9UHE5 227 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 PCTPQ9UKL6 214 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 ANAPC10Q9UM13 185 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 AMMECR1Q9Y4X0 333 aaPredicted RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 PCYT1BQ9Y5K3 369 aaPredicted RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 V9GYS6 101 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 POLEQ07864 2286 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 CLIP1P30622 1438 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TROQ12816 1431 aaPredicted RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 RRBP1Q9P2E9 1410 aaKnown RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 MYLKQ15746 1914 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 MYOM2P54296 1465 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TCOF1Q13428 1488 aaKnown RBP1.05□□□□□ -2.24
VPS50-213ENST00000477572 DSCAMO60469 2012 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 SLIT2O94813 1529 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 TOPBP1Q92547 1522 aa1.05□□□□□ -2.24
VPS50-213ENST00000477572 BAZ1AQ9NRL2 1556 aaPredicted RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 KIAA2026Q5HYC2 2103 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 COL4A1P02462 1669 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 THSD7AQ9UPZ6 1657 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms