RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ADMP35318 185 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 RAB31Q13636 194 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 TMEM61Q8N0U2 210 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 DEFB125Q8N687 156 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 ZNF709Q8N972 641 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 TMEM170AQ8WVE7 144 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 SLC35E1Q96K37 410 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 WWC2-AS2Q96NR7 200 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 C20orf24Q9BUV8 137 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 WFDC10AQ9H1F0 79 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 NPVFQ9HCQ7 196 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 KCNIP2Q9NS61 270 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 TECRQ9NZ01 308 aaKnown RBP6.23□□□□□ -1.41
HDAC6-221ENST00000477561 UFC1Q9Y3C8 167 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 TIMM9Q9Y5J7 89 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 YIF1AO95070 293 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 CTSGP08311 255 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 OPRK1P41145 380 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 SULT1A2P50226 295 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 MFAP4P55083 255 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 BLOC1S1P78537 153 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 SERF2P84101 59 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 AKR1C1Q04828 323 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 MLANAQ16655 118 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 PVRIGQ6DKI7 326 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 SPSB3Q6PJ21 355 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 SLC16A13Q7RTY0 426 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 OR2G3Q8NGZ4 309 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 TMEM190Q8WZ59 177 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 SAT2Q96F10 170 aaPredicted RBP6.22□□□□□ -1.41
HDAC6-221ENST00000477561 RCHY1Q96PM5 261 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 ZMAT4Q9H898 229 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 MRPL27Q9P0M9 148 aaKnown RBP6.22□□□□□ -1.41
HDAC6-221ENST00000477561 WDR83OSQ9Y284 106 aa6.22□□□□□ -1.41
HDAC6-221ENST00000477561 IGHV3-49A0A0A0MS15 119 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 ZNF705EA8MWA4 302 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-221ENST00000477561 A8MZ25 164 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 OR11H12B2RN74 326 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 NDUFA4O00483 81 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 LCE2BO14633 110 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 NUPL2O15504 423 aaKnown RBP6.21□□□□□ -1.42
HDAC6-221ENST00000477561 GNG7O60262 68 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 MBP02144 154 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 NMBP08949 121 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 ELLP55199 621 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-221ENST00000477561 HAGHQ16775 308 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 FAM74A1Q5RGS3 127 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 TEPPQ6URK8 271 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 TMEM182Q6ZP80 229 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-221ENST00000477561 RBPMS2Q6ZRY4 209 aaKnown RBP6.21□□□□□ -1.42
HDAC6-221ENST00000477561 TMEM144Q7Z5S9 345 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 MARC2Q969Z3 335 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 ZNF414Q96IQ9 312 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 NPCDR1Q9BY65 106 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 SH3BGRL3Q9H299 93 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 ZFAND3Q9H8U3 227 aa6.21□□□□□ -1.42
HDAC6-221ENST00000477561 IGHV3OR16-13A0A075B7E8 117 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 IGHV3-74A0A0B4J1X5 117 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 RBMY1BA6NDE4 496 aaKnown RBP6.2□□□□□ -1.42
HDAC6-221ENST00000477561 RBMY1EA6NEQ0 496 aaKnown RBP6.2□□□□□ -1.42
HDAC6-221ENST00000477561 RBMY1DP0C7P1 496 aaKnown RBP6.2□□□□□ -1.42
HDAC6-221ENST00000477561 CAMLGP49069 296 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 RAB2AP61019 212 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 GAMTQ14353 236 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 ATP6V0BQ99437 205 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 TXN2Q99757 166 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 TM2D3Q9BRN9 247 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 RSG1Q9BU20 258 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 SRD5A3Q9H8P0 318 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 RETNQ9HD89 108 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 DAZ1Q9NQZ3 744 aaKnown RBP6.2□□□□□ -1.42
HDAC6-221ENST00000477561 GAR1Q9NY12 217 aaKnown RBP6.2□□□□□ -1.42
HDAC6-221ENST00000477561 MRPL36Q9P0J6 103 aaKnown RBP6.2□□□□□ -1.42
HDAC6-221ENST00000477561 PFDN2Q9UHV9 154 aa6.2□□□□□ -1.42
HDAC6-221ENST00000477561 TENM3Q9P273 2699 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 IGKV3-7A0A075B6H7 116 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 TRAV25A0A0B4J276 109 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 LINC00862A6NCI5 91 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 TEX46H3BTG2 121 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 K7EMT4 169 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 SCGB2A1O75556 95 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 FCGR2BP31994 310 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-221ENST00000477561 NPBWR1P48145 328 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 RELQ04864 619 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-221ENST00000477561 ACOT6Q3I5F7 207 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-221ENST00000477561 TMEM41BQ5BJD5 291 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 TOMM20LQ6UXN7 152 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 Q6ZRG5 221 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 FAM213BQ8TBF2 198 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 ACY3Q96HD9 319 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 MGST2Q99735 147 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 FNDC4Q9H6D8 234 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-221ENST00000477561 MED9Q9NWA0 146 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 SMPXQ9UHP9 88 aa6.19□□□□□ -1.42
HDAC6-221ENST00000477561 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
HDAC6-221ENST00000477561 IGHV3-66A0A0C4DH42 116 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms