RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 CHD6Q8TD26 2715 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 SPINK4O60575 86 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 STAG3L2P0CL84 134 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 STAG3L3P0CL85 134 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 TEX43Q6ZNM6 134 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 PSG1P11464 419 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 RANP62826 216 aaKnown RBP10.7□□□□□ -0.7
HDAC7-221ENST00000477203 KCNIP4Q6PIL6 250 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 RNF2Q99496 336 aa10.7□□□□□ -0.7
HDAC7-221ENST00000477203 IGLC7A0M8Q6 106 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 CXorf1O96002 111 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 IGHV3-23P01764 117 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 OR1B1Q8NGR6 318 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 ORAOV1Q8WV07 137 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 NEU4Q8WWR8 484 aaPredicted RBP10.69□□□□□ -0.7
HDAC7-221ENST00000477203 CLUHP3Q96NS8 147 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 SETD2Q9BYW2 2564 aaPredicted RBP10.69□□□□□ -0.7
HDAC7-221ENST00000477203 NHLRC2Q8NBF2 726 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 BLNKQ8WV28 456 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 SRSF12Q8WXF0 261 aaKnown RBP10.69□□□□□ -0.7
HDAC7-221ENST00000477203 PYGO2Q9BRQ0 406 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 DPM3Q9P2X0 92 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 COX11Q9Y6N1 276 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 IGHV3OR16-8A0A075B7F1 116 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 A0A1W2PN81 502 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 PRR20EP86478 221 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 PRR20CP86479 221 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 PRR20DP86480 221 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 PRR20BP86481 221 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 PRR20AP86496 221 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 CYP2G1PQ6ZSU1 146 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 CSTL1Q9H114 145 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 FBXL7Q9UJT9 491 aa10.69□□□□□ -0.7
HDAC7-221ENST00000477203 IGHV3-35A0A0C4DH35 117 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 K7EP13 123 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 COX7A2P2O60397 106 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 HYPMO75409 117 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 VENTXO95231 258 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 FBN2P35556 2912 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 LGALS7P47929 136 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 MMD2Q8IY49 270 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 TRBV20OR9-2A0A075B6H5 130 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 CIDEAO60543 219 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 RBP4P02753 201 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 CRISP2P16562 243 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 SUB1P53999 127 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC7-221ENST00000477203 SGMS2Q8NHU3 365 aa10.68□□□□□ -0.7
HDAC7-221ENST00000477203 MT-CO2P00403 227 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 CRYBB3P26998 211 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 ZNF137PP52743 207 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 SIGLECL1Q8N7X8 197 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 LINC00479Q96M42 142 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 CST9LQ9H4G1 147 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 CREBBPQ92793 2442 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 KIAA1644Q3SXP7 199 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 OCIAD2Q56VL3 154 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 DTX2Q86UW9 622 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 TNFRSF19Q9NS68 423 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 NTF3P20783 257 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 ZNF355PQ9NSJ1 428 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 UQCR10Q9UDW1 63 aa10.67□□□□□ -0.7
HDAC7-221ENST00000477203 COMPP49747 757 aaPredicted RBP10.66□□□□□ -0.7
HDAC7-221ENST00000477203 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
HDAC7-221ENST00000477203 FAM120AOSQ5T036 256 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 EAF1Q96JC9 268 aaPredicted RBP10.66□□□□□ -0.7
HDAC7-221ENST00000477203 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 AMMECR1Q9Y4X0 333 aaPredicted RBP10.66□□□□□ -0.7
HDAC7-221ENST00000477203 FRMD6-AS1P0C7T7 363 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 AMTP48728 403 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 FXYD3Q14802 87 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 LY6G5BQ8NDX9 201 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 PERPQ96FX8 193 aa10.66□□□□□ -0.7
HDAC7-221ENST00000477203 EFNA4P52798 201 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 LCN12Q6JVE5 192 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 BBC3Q96PG8 261 aaPredicted RBP10.65□□□□□ -0.7
HDAC7-221ENST00000477203 MYO9AB2RTY4 2548 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 IGKV1D-37A0A075B6S9 117 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 TMEM250H0YL14 139 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 SLC17A3O00476 420 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 IGHV4-39P01824 125 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 LYZP61626 148 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 BRD3OSQ6XYD6 125 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 C8orf31Q8N9H6 132 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 TEX45Q8NA69 505 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 KCNIP2Q9NS61 270 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 SOX21Q9Y651 276 aaPredicted RBP10.65□□□□□ -0.7
HDAC7-221ENST00000477203 TEX15Q9BXT5 2789 aa10.65□□□□□ -0.7
HDAC7-221ENST00000477203 PRTN3P24158 256 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 PRR31Q5SQ13 230 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 PATE2Q6UY27 113 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 MEGF9Q9H1U4 602 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 TBL2Q9Y4P3 447 aaKnown RBP10.64□□□□□ -0.71
HDAC7-221ENST00000477203 HSBP1L1C9JCN9 74 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
HDAC7-221ENST00000477203 IGLC3P0DOY3 106 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms