RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TMEM41BQ5BJD5 291 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 TMED4Q7Z7H5 227 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 DTD1Q8TEA8 209 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 IL22RA2Q969J5 263 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 LINC00052Q96N35 136 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 IGKV1D-37A0A075B6S9 117 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 PIGBOS1A0A0B4J2F0 54 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 M0R2N4 97 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 CCNKO75909 580 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 ANXA3P12429 323 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
VARS2-208ENST00000477052 TCTAP57738 103 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 SRPXP78539 464 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 ASAH1Q13510 395 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 ETFRF1Q6IPR1 90 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 LGI3Q8N145 548 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 RNF125Q96EQ8 232 aa8.37□□□□□ -1.07
VARS2-208ENST00000477052 ZFP92A6NM28 416 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 F6UB75 175 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 SFT2D2O95562 160 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 IAPPP10997 89 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 VAMP1P23763 118 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 LYZP61626 148 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 IFITM3Q01628 133 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 PPP1R1AQ13522 171 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 GAMTQ14353 236 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 SMCO1Q147U7 214 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 SLC35B3Q9H1N7 401 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 C20orf85Q9H1P6 137 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 HSPB7Q9UBY9 170 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 FLVCR2Q9UPI3 526 aa8.36□□□□□ -1.07
VARS2-208ENST00000477052 DNAH2Q9P225 4427 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 A0A0B4J2A0 478 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 TCRBP04435 133 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 HLA-DRB4P13762 266 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 ZFP69Q49AA0 526 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 MZT2BQ6NZ67 158 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 OR4B1Q8NGF8 309 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 OR1S1Q8NH92 325 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 RNF126Q9BV68 326 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 SHPKQ9UHJ6 478 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 HLA-DRB4X5D2U9 266 aa8.35□□□□□ -1.07
VARS2-208ENST00000477052 PCLOQ9Y6V0 5065 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 C9orf170A2RU37 121 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 PRB4P10163 310 aaPredicted RBP8.34□□□□□ -1.07
VARS2-208ENST00000477052 HTN3P15516 51 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 NKX2-1P43699 371 aaPredicted RBP8.34□□□□□ -1.07
VARS2-208ENST00000477052 NUTF2P61970 127 aaKnown RBP8.34□□□□□ -1.07
VARS2-208ENST00000477052 ZNF709Q8N972 641 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 SLC35E1Q96K37 410 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 C20orf173Q96LM9 149 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 C1QTNF4Q9BXJ3 329 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 MAGT1Q9H0U3 335 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 U3KQ87 197 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 FAT2Q9NYQ8 4349 aa8.34□□□□□ -1.07
VARS2-208ENST00000477052 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 IGLV2-18A0A075B6J9 118 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 IGKV1OR2-108A0A075B7D4 117 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 FAM240BA0A1B0GVZ2 78 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 ZNF705FA8MVS1 300 aaPredicted RBP8.33□□□□□ -1.08
VARS2-208ENST00000477052 SOCS3O14543 225 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 AMBPP02760 352 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 PRM2P04554 102 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 OR4E1P0C645 316 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 ZNF705DP0CH99 300 aaPredicted RBP8.33□□□□□ -1.08
VARS2-208ENST00000477052 ZNF705BP0CI00 300 aaPredicted RBP8.33□□□□□ -1.08
VARS2-208ENST00000477052 ANXA7P20073 488 aaKnown RBP8.33□□□□□ -1.08
VARS2-208ENST00000477052 ZNF705AQ6ZN79 300 aaPredicted RBP8.33□□□□□ -1.08
VARS2-208ENST00000477052 NOXA1Q86UR1 476 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 SLC7A5P1Q8MH63 180 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 COQ8AQ8NI60 647 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 SAV1Q9H4B6 383 aaPredicted RBP8.33□□□□□ -1.08
VARS2-208ENST00000477052 NUDT15Q9NV35 164 aa8.33□□□□□ -1.08
VARS2-208ENST00000477052 RTL8CO15255 209 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 H2AFB2P0C5Z0 115 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 GATA2P23769 480 aaPredicted RBP8.32□□□□□ -1.08
VARS2-208ENST00000477052 C4orf46Q504U0 113 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 FAM78BQ5VT40 261 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 IGFL4Q6B9Z1 124 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 TMEM182Q6ZP80 229 aaPredicted RBP8.32□□□□□ -1.08
VARS2-208ENST00000477052 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 POM121L12Q8N7R1 296 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 ENKURQ8TC29 256 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 C17orf77Q96MU5 243 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 NDUFAF3Q9BU61 184 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 SEPSECSQ9HD40 501 aaKnown RBP8.32□□□□□ -1.08
VARS2-208ENST00000477052 CACFD1Q9UGQ2 172 aa8.32□□□□□ -1.08
VARS2-208ENST00000477052 TRAV6A0A075B6T7 132 aa8.31□□□□□ -1.08
VARS2-208ENST00000477052 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
VARS2-208ENST00000477052 PITX3O75364 302 aa8.31□□□□□ -1.08
VARS2-208ENST00000477052 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
VARS2-208ENST00000477052 SLC25A6P12236 298 aa8.31□□□□□ -1.08
VARS2-208ENST00000477052 M6PRP20645 277 aa8.31□□□□□ -1.08
VARS2-208ENST00000477052 GPX4P36969 197 aaPredicted RBP8.31□□□□□ -1.08
VARS2-208ENST00000477052 ID1P41134 155 aa8.31□□□□□ -1.08
VARS2-208ENST00000477052 PSMB3P49720 205 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms