RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PPP1R2P41236 205 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 UBE2BP63146 152 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 BCL2L15Q5TBC7 163 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 PPP1R2P3Q6NXS1 205 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 TEX47Q8TBZ9 253 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 CANT1Q8WVQ1 401 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 GINS3Q9BRX5 216 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 C6orf62Q9GZU0 229 aaPredicted RBP1.64□□□□□ -2.15
VPS50-212ENST00000476413 SS18L2Q9UHA2 77 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 CHCHD2Q9Y6H1 151 aaPredicted RBP1.64□□□□□ -2.15
VPS50-212ENST00000476413 NUP210LQ5VU65 1888 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 PLXNA4Q9HCM2 1894 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 ADGRB2O60241 1585 aa1.64□□□□□ -2.15
VPS50-212ENST00000476413 NUP98P52948 1817 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 MCM3APO60318 1980 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 KMT2BQ9UMN6 2715 aaPredicted RBP1.63□□□□□ -2.15
VPS50-212ENST00000476413 B4DSR2 109 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 G3V2T6 193 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 BANF1O75531 89 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 ROMO1P60602 79 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 ODF3Q96PU9 254 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 SH3BGRL3Q9H299 93 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 PCTPQ9UKL6 214 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 TECTAO75443 2155 aa1.63□□□□□ -2.15
VPS50-212ENST00000476413 FBN3Q75N90 2809 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 A8MWV9 139 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 M0R2N4 97 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 DHFRP00374 187 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 AKR1C8PQ5T2L2 129 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 TMED4Q7Z7H5 227 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 CLECL1Q8IZS7 167 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 OR10K1Q8NGX5 313 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 OBSCN-AS1Q96MR7 158 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 PRRT1Q99946 306 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 HOPXQ9BPY8 73 aaPredicted RBP1.62□□□□□ -2.15
VPS50-212ENST00000476413 PAIP2Q9BPZ3 127 aaKnown RBP1.62□□□□□ -2.15
VPS50-212ENST00000476413 SLC25A21Q9BQT8 299 aaPredicted RBP1.62□□□□□ -2.15
VPS50-212ENST00000476413 LYRM2Q9NU23 88 aaPredicted RBP1.62□□□□□ -2.15
VPS50-212ENST00000476413 ACER3Q9NUN7 267 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 MYH3P11055 1940 aa1.62□□□□□ -2.15
VPS50-212ENST00000476413 H7C1C5 153 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 MFSD11O43934 449 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 GGCTO75223 188 aaKnown RBP1.61□□□□□ -2.15
VPS50-212ENST00000476413 PHBP35232 272 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 INSL3P51460 131 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 DYNLT3P51808 116 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 LCN6P62502 163 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 GNG3P63215 75 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 FAM19A2Q8N3H0 131 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 SMIM20Q8N5G0 67 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 TEX37Q96LM6 180 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 LYSMD1Q96S90 227 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 ZFP30Q9Y2G7 519 aa1.61□□□□□ -2.15
VPS50-212ENST00000476413 NCOA6Q14686 2063 aaPredicted RBP1.6□□□□□ -2.15
VPS50-212ENST00000476413 DUXBA0A1W2PPF3 345 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 ZNF736B4DX44 427 aaPredicted RBP1.6□□□□□ -2.15
VPS50-212ENST00000476413 AIPO00170 330 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 CRHP06850 196 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 NFYBP25208 207 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 POU6F1Q14863 301 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 Q8N814 137 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 OR2T35Q8NGX2 323 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 LINC00467Q9BRT7 94 aa1.6□□□□□ -2.15
VPS50-212ENST00000476413 IGKV2D-26A0A0A0MRZ7 120 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 TRBV6-7A0A0A0MS04 114 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 CCDC160A6NGH7 325 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 INE1O15225 51 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 HLA-EP13747 358 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 TAS2R41P59536 307 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 TEX261Q6UWH6 196 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 PATE2Q6UY27 113 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 OR13C6PQ8NH95 151 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 NPCDR1Q9BY65 106 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 KRTAP4-1Q9BYQ7 146 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 RASL12Q9NYN1 266 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 SSR3Q9UNL2 185 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 C22orf24Q9Y442 160 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 U3KQ87 197 aa1.59□□□□□ -2.15
VPS50-212ENST00000476413 KIAA1549Q9HCM3 1950 aa1.59□□□□□ -2.16
VPS50-212ENST00000476413 MYO5AQ9Y4I1 1855 aaKnown RBP1.58□□□□□ -2.16
VPS50-212ENST00000476413 ARHGEF11O15085 1522 aa1.58□□□□□ -2.16
VPS50-212ENST00000476413 G0S2P27469 103 aa1.58□□□□□ -2.16
VPS50-212ENST00000476413 GNG10P50151 68 aa1.58□□□□□ -2.16
VPS50-212ENST00000476413 GPER1Q99527 375 aa1.58□□□□□ -2.16
VPS50-212ENST00000476413 PBOV1Q9GZY1 135 aa1.58□□□□□ -2.16
VPS50-212ENST00000476413 IL20Q9NYY1 176 aa1.58□□□□□ -2.16
VPS50-212ENST00000476413 UFC1Q9Y3C8 167 aa1.58□□□□□ -2.16
VPS50-212ENST00000476413 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
VPS50-212ENST00000476413 CEP164Q9UPV0 1460 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 TENM1Q9UKZ4 2725 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 TCRBV4S1A1TA0A5B7 111 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 SNCBQ16143 134 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 SCGB2B2Q4G0G5 96 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 TMEM254Q8TBM7 123 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 PATE1Q8WXA2 126 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 GPX7Q96SL4 187 aaPredicted RBP1.57□□□□□ -2.16
VPS50-212ENST00000476413 OR2J1Q9GZK6 312 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 CDC42SE1Q9NRR8 79 aa1.57□□□□□ -2.16
VPS50-212ENST00000476413 RIIAD1A6NNX1 92 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 PIAS1O75925 651 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms