RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 PRR20BP86481 221 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 PRR20AP86496 221 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 TIGITQ495A1 244 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 SNRNP40Q96DI7 357 aaKnown RBP6.78□□□□□ -1.32
VAPB-205ENST00000476395 MBD6Q96DN6 1003 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 IZUMO1RA6ND01 250 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 HIGD1CA8MV81 97 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 F2RL2O00254 374 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 TSPAN13O95857 204 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 LHBP01229 141 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 DHRS13Q6UX07 377 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 C12orf54Q6X4T0 127 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 GCSAMQ8N6F7 178 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 RNF152Q8N8N0 203 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 LEAP2Q969E1 77 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 C18orf15Q96N68 181 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 COL25A1Q9BXS0 654 aaPredicted RBP6.78□□□□□ -1.32
VAPB-205ENST00000476395 RAB9BQ9NP90 201 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 FCGR3BO75015 233 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 HTR1DP28221 377 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 CFHR2P36980 270 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 FXYD7P58549 80 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 MZT1Q08AG7 82 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 MBNL2Q5VZF2 373 aaKnown RBP6.77□□□□□ -1.33
VAPB-205ENST00000476395 CXXC4Q9H2H0 198 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 INTS1Q8N201 2190 aaKnown RBP6.77□□□□□ -1.33
VAPB-205ENST00000476395 PIEZO2Q9H5I5 2752 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 CHD8Q9HCK8 2581 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 A0A1W2PRE2 83 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 INO80CQ6PI98 192 aaPredicted RBP6.77□□□□□ -1.33
VAPB-205ENST00000476395 C22orf34Q6ZV56 151 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 NEGR1Q7Z3B1 354 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 NEU4Q8WWR8 484 aaPredicted RBP6.77□□□□□ -1.33
VAPB-205ENST00000476395 RAX2Q96IS3 184 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 IGF2BP2-AS1Q96M15 143 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 SRSF8Q9BRL6 282 aaKnown RBP6.77□□□□□ -1.33
VAPB-205ENST00000476395 OSTCQ9NRP0 149 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 TMEM14BQ9NUH8 114 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 PSG8Q9UQ74 426 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 SRRM5B3KS81 715 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
VAPB-205ENST00000476395 FABP6P51161 128 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 CATR1Q13166 79 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 CT45A1Q5HYN5 189 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 ZNRF1Q8ND25 227 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 CT45A3Q8NHU0 189 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 NPFFR1Q9GZQ6 430 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 SAP30LQ9HAJ7 183 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 ZNRD1Q9P1U0 126 aa6.77□□□□□ -1.33
VAPB-205ENST00000476395 IGHV3OR15-7A0A075B7D8 119 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 TRGV8A0A0C4DH27 118 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 PSMB11A5LHX3 300 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 PRDX2P32119 198 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 GNG5P63218 68 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 SRRM4A7MD48 611 aaKnown RBP6.76□□□□□ -1.33
VAPB-205ENST00000476395 ISLRO14498 428 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 HIST1H1AQ02539 215 aaPredicted RBP6.76□□□□□ -1.33
VAPB-205ENST00000476395 KIR3DS1Q14943 382 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 LINC00322Q6ZN03 302 aaPredicted RBP6.76□□□□□ -1.33
VAPB-205ENST00000476395 ZNF788Q6ZQV5 615 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 LRRC29Q8WV35 223 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 NRGNQ92686 78 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 RABAC1Q9UI14 185 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 DUSP13Q9UII6 198 aa6.76□□□□□ -1.33
VAPB-205ENST00000476395 C15orf61A6NNL5 157 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 FSTL3O95633 263 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 IGHV3-48P01763 117 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 SRSF1Q07955 248 aaKnown RBP eCLIP6.75□□□□□ -1.33
VAPB-205ENST00000476395 TCF15Q12870 199 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 TMEM97Q5BJF2 176 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 FAM201AQ5SY85 155 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 IDI2-AS1Q9NZ38 188 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 TCF19Q9Y242 345 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 A0A0G2JLM5 398 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 K7EP34 96 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 HLA-DRB1P01911 266 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 FAM106CPP0CH98 169 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 SAA2P0DJI9 122 aaPredicted RBP6.75□□□□□ -1.33
VAPB-205ENST00000476395 PYYP10082 97 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 HIST1H1EP10412 219 aaKnown RBP6.75□□□□□ -1.33
VAPB-205ENST00000476395 GAGE5Q13069 117 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 GAGE6Q13070 117 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 FAM106AQ4KMX7 169 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 RUSC1-AS1Q66K80 236 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 DEFB124Q8NES8 71 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 PRSS33Q8NF86 280 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 OR10AG1Q8NH19 301 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 F11RQ9Y624 299 aaKnown RBP6.75□□□□□ -1.33
VAPB-205ENST00000476395 K7ERJ3 54 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 PLAUP00749 431 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 ADH4P08319 380 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 EDDM3AQ14507 147 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 TCTEX1D4Q5JR98 221 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 PIP4P1Q86T03 277 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 OR2K2Q8NGT1 345 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 TTTY13Q9BZ97 58 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 JPT1Q9UK76 154 aa6.75□□□□□ -1.33
VAPB-205ENST00000476395 NCOR2Q9Y618 2525 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms