RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TSPAN5P62079 268 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 LSM6P62312 80 aaKnown RBP2.01□□□□□ -2.09
PTCD3-211ENST00000476215 HIST1H3AP68431 136 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 GLO1Q04760 184 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 ZNF181Q2M3W8 571 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 HIST2H3PS2Q5TEC6 136 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 HIST2H3AQ71DI3 136 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 TEX29Q8N6K0 151 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 ZNF283Q8N7M2 679 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 C3orf56Q8N813 242 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 OR5L1Q8NGL2 311 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 SLC7A6Q92536 515 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 Q96M85 177 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 FGFR1OP2Q9NVK5 253 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 SAMHD1Q9Y3Z3 626 aaKnown RBP2.01□□□□□ -2.09
PTCD3-211ENST00000476215 IER3IP1Q9Y5U9 82 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 H7C1C5 153 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 RER1O15258 196 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 SGCEO43556 437 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 NDUFB2O95178 105 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 SERPINA1P01009 418 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 PSKH1P11801 424 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 ZNF3P17036 446 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 PSMB9P28065 219 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 CRABP1P29762 137 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 TSPOP30536 169 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 PYCR1P32322 319 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 OMPP47874 163 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 SRP9P49458 86 aaKnown RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 SMIM11AP58511 58 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 FXYD6P3P58550 94 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 LCN6P62502 163 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 UBA52P62987 128 aaKnown RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 TNFAIP6P98066 277 aaPredicted RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 TMEM155Q4W5P6 130 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 MESTQ5EB52 335 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 OR2T2Q6IF00 324 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 ARPINQ7Z6K5 226 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 NAA40Q86UY6 237 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 OR6V1Q8N148 313 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 SIGLECL1Q8N7X8 197 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 DEFB108BQ8NET1 73 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 SGMS2Q8NHU3 365 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 CMTM5Q96DZ9 223 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 ERMAPQ96PL5 475 aaPredicted RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 GPX7Q96SL4 187 aaPredicted RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 B9D2Q9BPU9 175 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 NDEL1Q9GZM8 345 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 ARL6Q9H0F7 186 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 RERGLQ9H628 205 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 IFT46Q9NQC8 304 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 KCNIP2Q9NS61 270 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 TMEM106BQ9NUM4 274 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 UBAP1Q9NZ09 502 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 CD300AQ9UGN4 299 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 ATPIF1Q9UII2 106 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 FAM32AQ9Y421 112 aaKnown RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 SOX21Q9Y651 276 aaPredicted RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 LHFPL6Q9Y693 200 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 URGCP-MRPS24S4R325 110 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 PRKDCP78527 4128 aaKnown RBP2□□□□□ -2.09
PTCD3-211ENST00000476215 DNAH3Q8TD57 4116 aa2□□□□□ -2.09
PTCD3-211ENST00000476215 NBEAL2Q6ZNJ1 2754 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 WNK1Q9H4A3 2382 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 IQCF6A8MYZ5 107 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 F5H5K5 113 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 CDIPTO14735 213 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 SPNP16150 400 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 HIST1H1CP16403 213 aaKnown RBP1.99□□□□□ -2.09
PTCD3-211ENST00000476215 GZMHP20718 246 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 CD200P41217 278 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 ACTG1P63261 375 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 KRR1Q13601 381 aaKnown RBP1.99□□□□□ -2.09
PTCD3-211ENST00000476215 MMDQ15546 238 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 FAM201AQ5SY85 155 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 C10orf91Q5T1B1 145 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 LAMTOR1Q6IAA8 161 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 ZNF322Q6U7Q0 402 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-211ENST00000476215 LRRN1Q6UXK5 716 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 OR5AS1Q8N127 324 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 OR4K13Q8NH42 304 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 GNPDA2Q8TDQ7 276 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 POP5Q969H6 163 aaKnown RBP1.99□□□□□ -2.09
PTCD3-211ENST00000476215 HIST1H2BAQ96A08 127 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 NMNAT3Q96T66 252 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 IL20Q9NYY1 176 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 PHLDA3Q9Y5J5 127 aa1.99□□□□□ -2.09
PTCD3-211ENST00000476215 TENM3Q9P273 2699 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 TRAV8-2A0A0B4J237 113 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 FAM183AA6NL82 134 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 RNASEK-C17orf49H0YIS7 233 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 BHLHE40O14503 412 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 PHYHO14832 338 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 ATP8B1O43520 1251 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 NDUFA2O43678 99 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 GADD45GO95257 159 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 IFNGR2P38484 337 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 FGF12P61328 243 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 ARF6P62330 175 aa1.98□□□□□ -2.09
PTCD3-211ENST00000476215 TSPAN31Q12999 210 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms