RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 C7orf66A4D0T2 115 aa15.46■□□□□ 0.07
LIME1-204ENST00000476183 FAM25EA8MYX2 175 aa15.46■□□□□ 0.07
LIME1-204ENST00000476183 TSC22D2O75157 780 aa15.46■□□□□ 0.07
LIME1-204ENST00000476183 CFDP00746 253 aaPredicted RBP15.46■□□□□ 0.07
LIME1-204ENST00000476183 TAS2R30P59541 319 aa15.46■□□□□ 0.07
LIME1-204ENST00000476183 RRAS2P62070 204 aaPredicted RBP15.46■□□□□ 0.07
LIME1-204ENST00000476183 MZT2BQ6NZ67 158 aa15.46■□□□□ 0.07
LIME1-204ENST00000476183 PPP1R14BQ96C90 147 aa15.46■□□□□ 0.07
LIME1-204ENST00000476183 RARRES2Q99969 163 aa15.46■□□□□ 0.07
LIME1-204ENST00000476183 SEPSECSQ9HD40 501 aaKnown RBP15.46■□□□□ 0.07
LIME1-204ENST00000476183 ALMS1Q8TCU4 4167 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 LCE6AA0A183 80 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 UPK1BO75841 260 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 C4BPBP20851 252 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 SNRPD3P62318 126 aaKnown RBP15.45■□□□□ 0.06
LIME1-204ENST00000476183 DLK1P80370 383 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 ARL16Q0P5N6 197 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 ZNF846Q147U1 533 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 BPIFCQ8NFQ6 507 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 OR11H2Q8NH07 326 aa15.45■□□□□ 0.06
LIME1-204ENST00000476183 SOCS3O14543 225 aa15.44■□□□□ 0.06
LIME1-204ENST00000476183 ORM2P19652 201 aa15.44■□□□□ 0.06
LIME1-204ENST00000476183 CYP2G1PQ6ZSU1 146 aa15.44■□□□□ 0.06
LIME1-204ENST00000476183 OR8I2Q8N0Y5 310 aa15.44■□□□□ 0.06
LIME1-204ENST00000476183 FBXL17Q9UF56 701 aa15.44■□□□□ 0.06
LIME1-204ENST00000476183 C5orf51A6NDU8 294 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 K7EPK0 472 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 DEFB1P60022 68 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 OR10P1Q8NGE3 313 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 C17orf77Q96MU5 243 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 SLC25A32Q9H2D1 315 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 C11orf1Q9H5F2 150 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 SLC45A2Q9UMX9 530 aa15.43■□□□□ 0.06
LIME1-204ENST00000476183 LSM5Q9Y4Y9 91 aaKnown RBP15.43■□□□□ 0.06
LIME1-204ENST00000476183 ZNF98A6NK75 572 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 IL5P05113 134 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 SPP1P10451 314 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 PMS2P11Q13670 270 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 MORN3Q6PF18 240 aaPredicted RBP15.42■□□□□ 0.06
LIME1-204ENST00000476183 OR1B1Q8NGR6 318 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 C2orf50Q96LR7 162 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 SLC25A22Q9H936 323 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 DOK5Q9P104 306 aa15.42■□□□□ 0.06
LIME1-204ENST00000476183 FNDC10F2Z333 226 aa15.41■□□□□ 0.06
LIME1-204ENST00000476183 H3BMM0 161 aa15.41■□□□□ 0.06
LIME1-204ENST00000476183 ATF4P18848 351 aaPredicted RBP15.41■□□□□ 0.06
LIME1-204ENST00000476183 IL15RAQ13261 267 aa15.41■□□□□ 0.06
LIME1-204ENST00000476183 TMEM147Q9BVK8 224 aa15.41■□□□□ 0.06
LIME1-204ENST00000476183 NPVFQ9HCQ7 196 aa15.41■□□□□ 0.06
LIME1-204ENST00000476183 HYDINQ4G0P3 5121 aa15.41■□□□□ 0.06
LIME1-204ENST00000476183 GDF5OSQ5U4N7 250 aa15.4■□□□□ 0.06
LIME1-204ENST00000476183 ENKURQ8TC29 256 aa15.4■□□□□ 0.06
LIME1-204ENST00000476183 LINC00052Q96N35 136 aa15.4■□□□□ 0.06
LIME1-204ENST00000476183 SCRT1Q9BWW7 348 aa15.4■□□□□ 0.06
LIME1-204ENST00000476183 CLEC5AQ9NY25 188 aa15.4■□□□□ 0.06
LIME1-204ENST00000476183 MGAT4CQ9UBM8 478 aa15.4■□□□□ 0.06
LIME1-204ENST00000476183 CXorf65A6NEN9 183 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 L7N2F9 121 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 LINC00869P0C866 280 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 HLA-DRB4P13762 266 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 PSMB3P49720 205 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 PLP1P60201 277 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 VAMP2P63027 116 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 SLC38A11Q08AI6 406 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 CSNK1G2-AS1Q8NCQ2 148 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 C11orf68Q9H3H3 251 aaKnown RBP15.39■□□□□ 0.05
LIME1-204ENST00000476183 HLA-DRB4X5D2U9 266 aa15.39■□□□□ 0.05
LIME1-204ENST00000476183 H3BRN7 92 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 DEFB4AO15263 64 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 DEDDO75618 318 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 ID1P41134 155 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 GALR1P47211 349 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 SELENOTP62341 195 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 TMEM41BQ5BJD5 291 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 TEPPQ6URK8 271 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 NRARPQ7Z6K4 114 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 TMEM217Q8N7C4 229 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 C20orf173Q96LM9 149 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 RSG1Q9BU20 258 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 GGACTQ9BVM4 153 aa15.38■□□□□ 0.05
LIME1-204ENST00000476183 SLC25A39Q9BZJ4 359 aaPredicted RBP15.38■□□□□ 0.05
LIME1-204ENST00000476183 FAM24AA6NFZ4 105 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 HYPMO75409 117 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 BCAP31P51572 246 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 CAV2P51636 162 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 RAB32Q13637 225 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 PATE2Q6UY27 113 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 Q8NAQ8 132 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 SHANK2-AS3Q9BTD1 123 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 BATF3Q9NR55 127 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 HIGD1AQ9Y241 93 aa15.37■□□□□ 0.05
LIME1-204ENST00000476183 ISLRO14498 428 aa15.36■□□□□ 0.05
LIME1-204ENST00000476183 CST7O76096 145 aa15.36■□□□□ 0.05
LIME1-204ENST00000476183 S100A10P60903 97 aa15.36■□□□□ 0.05
LIME1-204ENST00000476183 UHRF2Q96PU4 802 aa15.36■□□□□ 0.05
LIME1-204ENST00000476183 SAV1Q9H4B6 383 aaPredicted RBP15.36■□□□□ 0.05
LIME1-204ENST00000476183 X6R8D5 127 aa15.36■□□□□ 0.05
LIME1-204ENST00000476183 ZNF705EA8MWA4 302 aaPredicted RBP15.35■□□□□ 0.05
LIME1-204ENST00000476183 AGPAT2O15120 278 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms