RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 OR8G2PQ6IF36 304 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 TMED4Q7Z7H5 227 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CENPSQ8N2Z9 138 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 CCDC32Q9BV29 185 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 PTTG2Q9NZH5 202 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 XCL2Q9UBD3 114 aa8.78□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 PKHD1P08F94 4074 aa8.77□□□□□ -1
MSH5-SAPCD1-205ENST00000476085 IGKV1OR2-108A0A075B7D4 117 aa8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 DUXBA0A1W2PPF3 345 aa8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 C1orf194Q5T5A4 169 aa8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 LRTM2Q8N967 370 aa8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 ZNF709Q8N972 641 aa8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 C17orf77Q96MU5 243 aa8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SDHCQ99643 169 aaPredicted RBP8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SCRT1Q9BWW7 348 aa8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 DEFB131BA0A096LNP1 70 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 A8MTW9 85 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PRSS46E5RG02 174 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 NDUFB6O95139 128 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SLC25A6P12236 298 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 VAMP1P23763 118 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 NUP62P37198 522 aaPredicted RBP8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 DEFB1P60022 68 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 THAP8Q8NA92 274 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 TRGV9Q99603 122 aa8.76□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SMIM9A6NGZ8 99 aa8.75□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PSMB3P49720 205 aa8.75□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PAX9P55771 341 aa8.75□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 FOXI2Q6ZQN5 318 aa8.75□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 ZNF767PQ75MW2 155 aa8.75□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 MUC4Q99102 2169 aa8.75□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 LINC00854A0A1B0GVQ3 168 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 ZFP92A6NM28 416 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SNRPGP15A8MWD9 76 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SFT2D2O95562 160 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 ZNF846Q147U1 533 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SPATA31B1PQ5VZV4 182 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 POM121L12Q8N7R1 296 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PFDN2Q9UHV9 154 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 TMED3Q9Y3Q3 217 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 TMEM189A5PLL7 270 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 ISLRO14498 428 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 LYRM1O43325 122 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 ID1P41134 155 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PPP1R1AQ13522 171 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 C1orf158Q8N1D5 194 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 OR1S1Q8NH92 325 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 COQ8AQ8NI60 647 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SLC35E1Q96K37 410 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PBDC1Q9BVG4 233 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 DKK2Q9UBU2 259 aa8.73□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PKD1P98161 4303 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 A0A0J9YX75 114 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 RTL8CO15255 209 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SPART-AS1P0CW21 52 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 P0DMU3 169 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 FAM231AP0DMU4 169 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 FAM231CP0DMU5 169 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 LYZP61626 148 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 PSG9Q00887 426 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 OXA1LQ15070 435 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 MZT2BQ6NZ67 158 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 GSG1LQ6UXU4 331 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 FAM210BQ96KR6 192 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 C20orf173Q96LM9 149 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 LINC00052Q96N35 136 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 NDUFAF3Q9BU61 184 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SLC35B3Q9H1N7 401 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 SLC45A2Q9UMX9 530 aa8.72□□□□□ -1.01
MSH5-SAPCD1-205ENST00000476085 C9orf170A2RU37 121 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 PLA2G10O15496 165 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 CFDP00746 253 aaPredicted RBP8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 IGKV3-20P01619 116 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 FABP1P07148 127 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 OR4E1P0C645 316 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 IAPPP10997 89 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 BTCP35070 178 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 FXYD7P58549 80 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 RAB11AP62491 216 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 OR2F1Q13607 317 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 LGALS9BQ3B8N2 356 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 C4orf46Q504U0 113 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 FAM78BQ5VT40 261 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 GGNBP1Q5YKI7 109 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 TMEM182Q6ZP80 229 aaPredicted RBP8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 Q6ZR54 194 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 RFNGQ9Y644 331 aa8.71□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 FAM240BA0A1B0GVZ2 78 aa8.7□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 ZNF98A6NK75 572 aa8.7□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 F6UB75 175 aa8.7□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 SYNGR2O43760 224 aa8.7□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 MED6O75586 246 aa8.7□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 IFNA21P01568 189 aa8.7□□□□□ -1.02
MSH5-SAPCD1-205ENST00000476085 ID3Q02535 119 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms