RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 BPIFCQ8NFQ6 507 aa8.33□□□□□ -1.08
NUDCD3-206ENST00000475952 SLC45A2Q9UMX9 530 aa8.33□□□□□ -1.08
NUDCD3-206ENST00000475952 TRAV6A0A075B6T7 132 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 TCRBP04435 133 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 ID1P41134 155 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 NUTF2P61970 127 aaKnown RBP8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 EWSR1Q01844 656 aaKnown RBP eCLIP8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 ZNF846Q147U1 533 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 OR8I2Q8N0Y5 310 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 ZBTB8BQ8NAP8 495 aaPredicted RBP8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 S100ZQ8WXG8 99 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 SMIM8Q96KF7 97 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 RAB40CQ96S21 281 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 NUDT15Q9NV35 164 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 GSKIPQ9P0R6 139 aa8.32□□□□□ -1.08
NUDCD3-206ENST00000475952 TSC22D2O75157 780 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 C4BPBP20851 252 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 PSMB3P49720 205 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 MEOX2P50222 304 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 TMEM14EPQ6UXP3 125 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 TMEM144Q7Z5S9 345 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 TMEM147Q9BVK8 224 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 C1QTNF4Q9BXJ3 329 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 MFFQ9GZY8 342 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 MGAT4CQ9UBM8 478 aa8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 KLK5Q9Y337 293 aaPredicted RBP8.31□□□□□ -1.08
NUDCD3-206ENST00000475952 FAM240BA0A1B0GVZ2 78 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 PMS2P5A8MQ11 134 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 IL5P05113 134 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 METTL15P1P0C7V9 234 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 HLA-DRB4P13762 266 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 ORM2P19652 201 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 GATA2P23769 480 aaPredicted RBP8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 GALR1P47211 349 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 TAS2R30P59541 319 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 SELENOTP62341 195 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 DLK1P80370 383 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 MZT2BQ6NZ67 158 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 CYP2G1PQ6ZSU1 146 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 OR10P1Q8NGE3 313 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 OR1B1Q8NGR6 318 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 C11orf45Q8TAV5 145 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 ZNF431Q8TF32 576 aaPredicted RBP8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 GPR82Q96P67 336 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 WDR12Q9GZL7 423 aaKnown RBP8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 SLC25A22Q9H936 323 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 RCL1Q9Y2P8 373 aaKnown RBP8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 HLA-DRB4X5D2U9 266 aa8.3□□□□□ -1.08
NUDCD3-206ENST00000475952 ZNF98A6NK75 572 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 ZNF705EA8MWA4 302 aaPredicted RBP8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 FAM25EA8MYX2 175 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 L7N2F9 121 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 ISLRO14498 428 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 CCSO14618 274 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 H2AFB2P0C5Z0 115 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 MIFP14174 115 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 PAX9P55771 341 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 RAP2BP61225 183 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 RRAS2P62070 204 aaPredicted RBP8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 VAMP2P63027 116 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 CEMP1Q6PRD7 247 aaPredicted RBP8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 FOXI2Q6ZQN5 318 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 S100A7AQ86SG5 101 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 LINC00052Q96N35 136 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 SLC25A32Q9H2D1 315 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 SAV1Q9H4B6 383 aaPredicted RBP8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 NPVFQ9HCQ7 196 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 TBC1D24Q9ULP9 559 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 PKHD1P08F94 4074 aa8.29□□□□□ -1.08
NUDCD3-206ENST00000475952 C7orf66A4D0T2 115 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 H3BMM0 161 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 SOCS3O14543 225 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 CCNKO75909 580 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 MBPP02686 304 aaPredicted RBP8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 GIG44P09565 113 aaPredicted RBP8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 LINC00869P0C866 280 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 SPATA31B1PQ5VZV4 182 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 TEPPQ6URK8 271 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 C12orf45Q8N5I9 185 aaPredicted RBP8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 Q8NAQ8 132 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 PHLDA1Q8WV24 401 aaPredicted RBP8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 LINC00476Q8WZB0 136 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 C16orf92Q96LL3 132 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 SEC22CQ9BRL7 303 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 GGACTQ9BVM4 153 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 CLEC5AQ9NY25 188 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 DOK5Q9P104 306 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 LSM5Q9Y4Y9 91 aaKnown RBP8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 VPS13DQ5THJ4 4388 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
NUDCD3-206ENST00000475952 IGHV4-28A0A0C4DH34 117 aa8.27□□□□□ -1.09
NUDCD3-206ENST00000475952 H3BRN7 92 aa8.27□□□□□ -1.09
NUDCD3-206ENST00000475952 DEFB4AO15263 64 aa8.27□□□□□ -1.09
NUDCD3-206ENST00000475952 PVALBP20472 110 aaPredicted RBP8.27□□□□□ -1.09
NUDCD3-206ENST00000475952 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
NUDCD3-206ENST00000475952 ASAH1Q13510 395 aa8.27□□□□□ -1.09
NUDCD3-206ENST00000475952 GDF5OSQ5U4N7 250 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms