RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
CPSF3-203ENST00000475482 A0A087WW49 117 aa11.96□□□□□ -0.49
CPSF3-203ENST00000475482 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.49
CPSF3-203ENST00000475482 HSPB1P04792 205 aaKnown RBP11.96□□□□□ -0.49
CPSF3-203ENST00000475482 IGLC1P0CG04 106 aa11.96□□□□□ -0.49
CPSF3-203ENST00000475482 RHOBP62745 196 aa11.96□□□□□ -0.49
CPSF3-203ENST00000475482 IL34Q6ZMJ4 242 aa11.96□□□□□ -0.49
CPSF3-203ENST00000475482 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 ELOA3CA0A087WX78 387 aaPredicted RBP11.95□□□□□ -0.5
CPSF3-203ENST00000475482 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 OVOL1O14753 267 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 NUPL2O15504 423 aaKnown RBP11.95□□□□□ -0.5
CPSF3-203ENST00000475482 LINC00869P0C866 280 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 S100A7P31151 101 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 CDC34P49427 236 aaPredicted RBP11.95□□□□□ -0.5
CPSF3-203ENST00000475482 TPPP2P59282 170 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 YPEL3P61236 119 aaPredicted RBP11.95□□□□□ -0.5
CPSF3-203ENST00000475482 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 GATAD1Q8WUU5 269 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 SFT2D1Q8WV19 159 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 MS4A10Q96PG2 267 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 HRH4Q9H3N8 390 aa11.95□□□□□ -0.5
CPSF3-203ENST00000475482 MRPL36Q9P0J6 103 aaKnown RBP11.95□□□□□ -0.5
CPSF3-203ENST00000475482 YIF1AO95070 293 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 IGHV3-11P01762 117 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 RD3LP0DJH9 198 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 FHITP49789 147 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 SLURP1P55000 103 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 FAM122CQ6P4D5 195 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 COMMD7Q86VX2 200 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
CPSF3-203ENST00000475482 ZNF502Q8TBZ5 544 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 MARC2Q969Z3 335 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 VSIRQ9H7M9 311 aa11.94□□□□□ -0.5
CPSF3-203ENST00000475482 ZNF256Q9Y2P7 627 aaPredicted RBP11.94□□□□□ -0.5
CPSF3-203ENST00000475482 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 MAP1LC3B2A6NCE7 125 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 MFSD2BA6NFX1 497 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 COX7A2P2O60397 106 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 TOMM40O96008 361 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 TAS2R45P59539 299 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 ZNF90Q03938 601 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 SPSB3Q6PJ21 355 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 Q8WTZ3 238 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 PRR25Q96S07 402 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 PBDC1Q9BVG4 233 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 MRPL32Q9BYC8 188 aaKnown RBP11.93□□□□□ -0.5
CPSF3-203ENST00000475482 MAP1LC3BQ9GZQ8 125 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 DNAJC4Q9NNZ3 241 aa11.93□□□□□ -0.5
CPSF3-203ENST00000475482 PLP1P60201 277 aa11.92□□□□□ -0.5
CPSF3-203ENST00000475482 TIGITQ495A1 244 aa11.92□□□□□ -0.5
CPSF3-203ENST00000475482 C10orf113Q5VZT2 155 aa11.92□□□□□ -0.5
CPSF3-203ENST00000475482 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
CPSF3-203ENST00000475482 SLC25A22Q9H936 323 aa11.92□□□□□ -0.5
CPSF3-203ENST00000475482 RNF24Q9Y225 148 aa11.92□□□□□ -0.5
CPSF3-203ENST00000475482 HYPMO75409 117 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 IFNA1P01562 189 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 IGKV1-17P01599 117 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 OR5G3P0C626 314 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 PSG1P11464 419 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 PPT1P50897 306 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 RELQ04864 619 aaPredicted RBP11.91□□□□□ -0.5
CPSF3-203ENST00000475482 FAM78BQ5VT40 261 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 UQCC3Q6UW78 93 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 LCN15Q6UWW0 184 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 SLC7A5P1Q8MH63 180 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 EIF4E3Q8N5X7 224 aaKnown RBP11.91□□□□□ -0.5
CPSF3-203ENST00000475482 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
CPSF3-203ENST00000475482 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
CPSF3-203ENST00000475482 OR2T8A6NH00 312 aa11.9□□□□□ -0.5
CPSF3-203ENST00000475482 CXorf1O96002 111 aa11.9□□□□□ -0.5
CPSF3-203ENST00000475482 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
CPSF3-203ENST00000475482 TAGLN2P37802 199 aaKnown RBP11.9□□□□□ -0.5
CPSF3-203ENST00000475482 KHDC3LQ587J8 217 aa11.9□□□□□ -0.5
CPSF3-203ENST00000475482 ZNF600Q6ZNG1 722 aa11.9□□□□□ -0.5
CPSF3-203ENST00000475482 OR1B1Q8NGR6 318 aa11.9□□□□□ -0.5
CPSF3-203ENST00000475482 S4R3C0 116 aa11.9□□□□□ -0.5
CPSF3-203ENST00000475482 STAB2Q8WWQ8 2551 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 TENM3Q9P273 2699 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 TGOLN2O43493 480 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 SAP30O75446 220 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 OR2C1O95371 312 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 IGHV3-23P01764 117 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 CLEC3BP05452 202 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 CTSGP08311 255 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 ORM2P19652 201 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 ZP3P21754 424 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 GPR183P32249 361 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 PSMB3P49720 205 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
CPSF3-203ENST00000475482 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 GCSAMLQ5JQS6 135 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 STXBP6Q8NFX7 210 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 CITED4Q96RK1 184 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 SMDT1Q9H4I9 107 aa11.89□□□□□ -0.51
CPSF3-203ENST00000475482 HIGD1AQ9Y241 93 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms