RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 A0A1B0GU03 582 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 NBR2O15453 112 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 DUS4LO95620 317 aaKnown RBP9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 IGF1P05019 195 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 CTSDP07339 412 aaPredicted RBP9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 SCTP09683 121 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 PMCHP20382 165 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 BTCP35070 178 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 AMTP48728 403 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 TIRAPP58753 221 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 AGMATQ9BSE5 352 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 OR1A1Q9P1Q5 309 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 KIAA1456Q9P272 454 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 NAT8BQ9UHF3 227 aa9.04□□□□□ -0.96
HLA-DOB-208ENST00000475235 A0A0B4J2A0 478 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 LINC01548A6NM66 108 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 RAB27BO00194 218 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 HLA-DRB1P01911 266 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 ELANEP08246 267 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 TRGC1P0CF51 173 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 SLC25A4P12235 298 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 HIST1H1DP16402 221 aaKnown RBP9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 RHOBP62745 196 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 BATFQ16520 125 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 CXorf66Q5JRM2 361 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 NPBQ8NG41 125 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 OR13C6PQ8NH95 151 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 BTF3L4Q96K17 158 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 RNF5Q99942 180 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 HSPB9Q9BQS6 159 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 RNF167Q9H6Y7 350 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 FBXL17Q9UF56 701 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 SHPKQ9UHJ6 478 aa9.03□□□□□ -0.96
HLA-DOB-208ENST00000475235 NDUFA3O95167 84 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 FCGR3AP08637 254 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 CT45A6P0DMU7 189 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 CT45A5P0DMU8 189 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 CT45A7P0DMV0 189 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 GNB3P16520 340 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 ARFRP1Q13795 201 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 RPL39P5Q59GN2 51 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 NR2C2APQ86WQ0 139 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 ZNF695Q8IW36 515 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 DCUN1D4Q92564 292 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 GRAMD2BQ96HH9 432 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 ABHD14BQ96IU4 210 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 KCTD7Q96MP8 289 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 ATG5Q9H1Y0 275 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 WASHC3Q9Y3C0 194 aa9.02□□□□□ -0.97
HLA-DOB-208ENST00000475235 IGKV1-6A0A0C4DH72 117 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 GAGE12HA6NDE8 117 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 H0YJW9 148 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 CREBL2O60519 120 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 IGLL1P15814 213 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 MYCNOSP40205 109 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 THBS3P49746 956 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 CFHR3Q02985 330 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 TMEM97Q5BJF2 176 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 FAM162BQ5T6X4 162 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 CNIH2Q6PI25 160 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 LINC00482Q8N8I6 264 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 KLHL30-AS1Q8NEE0 82 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 Q8WTZ3 238 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 GINS3Q9BRX5 216 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 MCRIP2Q9BUT9 160 aaKnown RBP9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 C1orf43Q9BWL3 253 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 PARP12Q9H0J9 701 aaKnown RBP9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 WNK1Q9H4A3 2382 aa9.01□□□□□ -0.97
HLA-DOB-208ENST00000475235 TRBV6-7A0A0A0MS04 114 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 TMEM235A6NFC5 223 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 ZNF207O43670 478 aaKnown RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 IGLC1P0CG04 106 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 CNTFRP26992 372 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 ZFAND6Q6FIF0 208 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 SFXN4Q6P4A7 337 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 GLDNQ6ZMI3 551 aaPredicted RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 FOXI2Q6ZQN5 318 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 Q6ZS49 121 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 C8orf86Q6ZUL3 223 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 RBMXL1Q96E39 390 aaKnown RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 WDR89Q96FK6 387 aaPredicted RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 RITA1Q96K30 269 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 TMEM242Q9NWH2 141 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 IGHV7-81A0A0B4J1V7 117 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 B4DEV8 164 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 RRHO14718 337 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 APOA2P02652 100 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 TPT1P13693 172 aaKnown RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 TAS2R19P59542 299 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 HIST1H1AQ02539 215 aaPredicted RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 PLGLAQ15195 96 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 C19orf35Q6ZS72 473 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 PDPNQ86YL7 162 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 INO80EQ8NBZ0 244 aaPredicted RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 OR10G9Q8NGN4 311 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 SRSF8Q9BRL6 282 aaKnown RBP9□□□□□ -0.97
HLA-DOB-208ENST00000475235 NDFIP1Q9BT67 221 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms