RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ZNF880Q6PDB4 577 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 TMEM219Q86XT9 240 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF256Q9Y2P7 627 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 GBF1Q92538 1859 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 COL4A4P53420 1690 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 RBAKDNA6NC62 111 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 GGTLC3B5MD39 225 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 ATP6V0E1O15342 81 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 FOLR2P14207 255 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 SYNJ2BPP57105 145 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 FGFBP3Q8TAT2 258 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 DLX4Q92988 240 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 NHP2Q9NX24 153 aaKnown RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 IL36BQ9NZH7 164 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 TRGV1A0A0A0MS02 117 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 H3BQ85 93 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 PLAUP00749 431 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 GP9P14770 177 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 FABP4P15090 132 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 CENPWQ5EE01 88 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 ZCCHC24Q8N2G6 241 aaKnown RBP3.72□□□□□ -1.81
CCNL1-215ENST00000474539 COQ2Q96H96 371 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 DNAJC30Q96LL9 226 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF48Q96MX3 618 aaPredicted RBP3.72□□□□□ -1.81
CCNL1-215ENST00000474539 TCF20Q9UGU0 1960 aaKnown RBP3.72□□□□□ -1.81
CCNL1-215ENST00000474539 TRBV25-1A0A075B6N4 114 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 CENPVL3A0A0U1RRI6 287 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 M0R381 172 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 LDLRAD4O15165 306 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 NDUFA7O95182 113 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 LEPROTL1O95214 131 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 IGKV3-20P01619 116 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 IER3P46695 156 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 BATFQ16520 125 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 LYPD2Q6UXB3 125 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 SCGB3A1Q96QR1 104 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 GFRA4Q9GZZ7 299 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 CCDC88CQ9P219 2028 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 TRAV1-1A0A0B4J248 108 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 CGB1A6NKQ9 187 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 IFITM10A6NMD0 228 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 K7EMI3 77 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 OVOL3O00110 214 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 TMEM50AO95807 157 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 CA1P00915 261 aaPredicted RBP3.72□□□□□ -1.81
CCNL1-215ENST00000474539 EMP1P54849 157 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 DEFB131AP59861 70 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 ERCC8Q13216 396 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 MRPL23Q16540 153 aaKnown RBP3.72□□□□□ -1.81
CCNL1-215ENST00000474539 ACTL10Q5JWF8 245 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 LHFPL1Q86WI0 220 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF114Q8NC26 417 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 PTPRDP23468 1912 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 C7orf71A4D174 169 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF207O43670 478 aaKnown RBP3.72□□□□□ -1.81
CCNL1-215ENST00000474539 CDKN1BP46527 198 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 EFNB1P98172 346 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 VKORC1L1Q8N0U8 176 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 TMEM75Q8N9X5 138 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 MBD3L1Q8WWY6 194 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 ZNRD1Q9P1U0 126 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 RALGAPA1Q6GYQ0 2036 aa3.72□□□□□ -1.81
CCNL1-215ENST00000474539 MYOFQ9NZM1 2061 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 PHOX2AO14813 284 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 PLA2G10O15496 165 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 ATP5G1P05496 136 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 RPL35AP18077 110 aaKnown RBP3.71□□□□□ -1.81
CCNL1-215ENST00000474539 ATP5G3P48201 142 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 TMEM136Q6ZRR5 245 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 Q6ZSR3 168 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 RNF182Q8N6D2 247 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 TMEM37Q8WXS4 190 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 PGLYRP4Q96LB8 373 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 ICOSQ9Y6W8 199 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 ZDBF2Q9HCK1 2354 aa3.71□□□□□ -1.81
CCNL1-215ENST00000474539 BRCA2P51587 3418 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 IGHV1OR15-1A0A075B7D0 117 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 IGHV4-30-2A0A087WSY4 118 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 IGHV4-61A0A0C4DH41 118 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 F5H768 121 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 CSN3P07498 182 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 HILS1P60008 231 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 VWC2Q2TAL6 325 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 CT83Q5H943 113 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 TMEM14EPQ6UXP3 125 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 NFE4Q86UQ8 179 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 GPHB5Q86YW7 130 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 RTBDNQ9BSG5 229 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-215ENST00000474539 MEGF9Q9H1U4 602 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 NDUFA4L2Q9NRX3 87 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 A0A087X0M5 115 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 TRBV7-9A0A0J9YWB2 115 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 A0A1B0GX30 115 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 LHBP01229 141 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 IGHV3-23P01764 117 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 TYMSP04818 313 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 RNASE1P07998 156 aaKnown RBP3.71□□□□□ -1.82
CCNL1-215ENST00000474539 RNASE2P10153 161 aaKnown RBP3.71□□□□□ -1.82
CCNL1-215ENST00000474539 AWAT1Q58HT5 328 aa3.71□□□□□ -1.82
CCNL1-215ENST00000474539 ZNF492Q9P255 531 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms