RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 NUP62P37198 522 aaPredicted RBP13.94□□□□□ -0.18
PTCD3-210ENST00000473829 AP2S1P53680 142 aaPredicted RBP13.94□□□□□ -0.18
PTCD3-210ENST00000473829 SLC38A11Q08AI6 406 aa13.94□□□□□ -0.18
PTCD3-210ENST00000473829 DEFB135Q30KP9 77 aa13.94□□□□□ -0.18
PTCD3-210ENST00000473829 KIR2DL5AQ8N109 375 aa13.94□□□□□ -0.18
PTCD3-210ENST00000473829 KIR2DL5BQ8NHK3 375 aa13.94□□□□□ -0.18
PTCD3-210ENST00000473829 NPVFQ9HCQ7 196 aa13.94□□□□□ -0.18
PTCD3-210ENST00000473829 AGRNO00468 2067 aa13.94□□□□□ -0.18
PTCD3-210ENST00000473829 IGSF23A1L1A6 192 aa13.93□□□□□ -0.18
PTCD3-210ENST00000473829 DEDDO75618 318 aa13.93□□□□□ -0.18
PTCD3-210ENST00000473829 CST7O76096 145 aa13.93□□□□□ -0.18
PTCD3-210ENST00000473829 CFDP00746 253 aaPredicted RBP13.93□□□□□ -0.18
PTCD3-210ENST00000473829 ORM2P19652 201 aa13.93□□□□□ -0.18
PTCD3-210ENST00000473829 PPP1R14BQ96C90 147 aa13.93□□□□□ -0.18
PTCD3-210ENST00000473829 LYRM2Q9NU23 88 aaPredicted RBP13.93□□□□□ -0.18
PTCD3-210ENST00000473829 DOK5Q9P104 306 aa13.93□□□□□ -0.18
PTCD3-210ENST00000473829 STARD9Q9P2P6 4700 aa13.93□□□□□ -0.18
PTCD3-210ENST00000473829 KNCNA6PVL3 124 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 H2BFSP57053 126 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 C1orf194Q5T5A4 169 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 TEPPQ6URK8 271 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 TMEM217Q8N7C4 229 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 OR1B1Q8NGR6 318 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 MUC7Q8TAX7 377 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 GGACTQ9BVM4 153 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 PFDN2Q9UHV9 154 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 SLC45A2Q9UMX9 530 aa13.92□□□□□ -0.18
PTCD3-210ENST00000473829 UBE2CO00762 179 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 LINC00869P0C866 280 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 PVALBP20472 110 aaPredicted RBP13.91□□□□□ -0.18
PTCD3-210ENST00000473829 PSMG4Q5JS54 123 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 Q6ZWC4 215 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 TMEM252Q8N6L7 170 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 MGST2Q99735 147 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 SCRT1Q9BWW7 348 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 SLC25A32Q9H2D1 315 aa13.91□□□□□ -0.18
PTCD3-210ENST00000473829 CSMD3Q7Z407 3707 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 ZNF98A6NK75 572 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 SOCS3O14543 225 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 PLP1P60201 277 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 LRRC37A5PQ49AS3 106 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 TRPT1Q86TN4 253 aaKnown RBP13.9□□□□□ -0.18
PTCD3-210ENST00000473829 OR8I2Q8N0Y5 310 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 C17orf77Q96MU5 243 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 TMEM147Q9BVK8 224 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 NMES1Q9C002 83 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 SLC25A22Q9H936 323 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 OR5AC2Q9NZP5 309 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 FBXL17Q9UF56 701 aa13.9□□□□□ -0.18
PTCD3-210ENST00000473829 H0YIZ8 118 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 H3BRN7 92 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 AGPAT2O15120 278 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 SPRY2O43597 315 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 SSNA1O43805 119 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 SULT1A1P50225 295 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 SELENOTP62341 195 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 STHQ8IWL8 128 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 RNF183Q96D59 192 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 TP53TG1Q9Y2A0 90 aa13.89□□□□□ -0.19
PTCD3-210ENST00000473829 C3orf84H3BNL1 204 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 PTTG1O95997 202 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 VWC2Q2TAL6 325 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 ACTL10Q5JWF8 245 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 PATE2Q6UY27 113 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 UHRF2Q96PU4 802 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 SHANK2-AS3Q9BTD1 123 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
PTCD3-210ENST00000473829 SEPSECSQ9HD40 501 aaKnown RBP13.88□□□□□ -0.19
PTCD3-210ENST00000473829 HIGD1AQ9Y241 93 aa13.88□□□□□ -0.19
PTCD3-210ENST00000473829 HYPMO75409 117 aa13.87□□□□□ -0.19
PTCD3-210ENST00000473829 CA1P00915 261 aaPredicted RBP13.87□□□□□ -0.19
PTCD3-210ENST00000473829 DEFB1P60022 68 aa13.87□□□□□ -0.19
PTCD3-210ENST00000473829 SNRPD3P62318 126 aaKnown RBP13.87□□□□□ -0.19
PTCD3-210ENST00000473829 ZNF546Q86UE3 836 aa13.87□□□□□ -0.19
PTCD3-210ENST00000473829 ARL6Q9H0F7 186 aa13.87□□□□□ -0.19
PTCD3-210ENST00000473829 UQCC1Q9NVA1 299 aa13.87□□□□□ -0.19
PTCD3-210ENST00000473829 WDR83OSQ9Y284 106 aa13.87□□□□□ -0.19
PTCD3-210ENST00000473829 ALG5Q9Y673 324 aa13.87□□□□□ -0.19
PTCD3-210ENST00000473829 UBE2L5PA0A1B0GUS4 154 aa13.86□□□□□ -0.19
PTCD3-210ENST00000473829 GIG44P09565 113 aaPredicted RBP13.86□□□□□ -0.19
PTCD3-210ENST00000473829 OR5G3P0C626 314 aa13.86□□□□□ -0.19
PTCD3-210ENST00000473829 C4BPBP20851 252 aa13.86□□□□□ -0.19
PTCD3-210ENST00000473829 STX12Q86Y82 276 aa13.86□□□□□ -0.19
PTCD3-210ENST00000473829 PPP1R1CQ8WVI7 109 aa13.86□□□□□ -0.19
PTCD3-210ENST00000473829 LYL1P12980 280 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 S100A11P31949 105 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 GALR1P47211 349 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 PSMB3P49720 205 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 RAP2BP61225 183 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 CYCSP99999 105 aaKnown RBP13.85□□□□□ -0.19
PTCD3-210ENST00000473829 EWSR1Q01844 656 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTCD3-210ENST00000473829 NHLH2Q02577 135 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 CASC10Q5T4H9 136 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 GDF5OSQ5U4N7 250 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 ZFAND6Q6FIF0 208 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 RSG1Q9BU20 258 aa13.85□□□□□ -0.19
PTCD3-210ENST00000473829 E5RGE8 158 aa13.84□□□□□ -0.19
PTCD3-210ENST00000473829 CAMLGP49069 296 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms