RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 BLNKQ8WV28 456 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 RND1Q92730 232 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PGLYRP4Q96LB8 373 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 SCRT2Q9NQ03 307 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PIEZO2Q9H5I5 2752 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 CACNA1BQ00975 2339 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PRR14LQ5THK1 2151 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 TANC2Q9HCD6 1990 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PPIAL4EA0A075B759 164 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PPIAL4DF5H284 164 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 SIVA1O15304 175 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PPIAL4FP0DN26 164 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 COX8AP10176 69 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 GPR183P32249 361 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 GPR6P46095 362 aaPredicted RBP4.93□□□□□ -1.62
HERC4-209ENST00000473533 GDF5OSQ5U4N7 250 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 LINC01545Q5VT33 79 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 DHRS13Q6UX07 377 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 DEFB123Q8N688 67 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 FAM216BQ8N7L0 139 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 DEFB108BQ8NET1 73 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PRSS3P2Q8NHM4 247 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 VPS25Q9BRG1 176 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 SSBP4Q9BWG4 385 aaPredicted RBP4.93□□□□□ -1.62
HERC4-209ENST00000473533 PPIAL4AQ9Y536 164 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 CACNA1HO95180 2353 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 COL12A1Q99715 3063 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 IGKV1D-37A0A075B6S9 117 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 A0A1W2PNU3 283 aaPredicted RBP4.93□□□□□ -1.62
HERC4-209ENST00000473533 GP9P14770 177 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 WT1-ASQ06250 92 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 TCF24Q7RTU0 167 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 RPRMLQ8N4K4 120 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 LINC00479Q96M42 142 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 CLEC5AQ9NY25 188 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 RPH3ALQ9UNE2 315 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 PLCE1Q9P212 2302 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 LPAL2Q16609 132 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 MPV17L2Q567V2 206 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 PLA2G2CQ5R387 149 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 FDCSPQ8NFU4 85 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 OR4X2Q8NGF9 303 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 FNDC4Q9H6D8 234 aaPredicted RBP4.92□□□□□ -1.62
HERC4-209ENST00000473533 NGBQ9NPG2 151 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 PCNX1Q96RV3 2341 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 APC2O95996 2303 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 FSTL3O95633 263 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 CD40P25942 277 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 ARF6P62330 175 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 GNG5P63218 68 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 RBPJQ06330 500 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 FAM120AOSQ5T036 256 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 RASL11BQ9BPW5 248 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 RAB1BQ9H0U4 201 aa4.92□□□□□ -1.62
HERC4-209ENST00000473533 C17orf100A8MU93 164 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 TAX1BP3O14907 124 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 PDE6HQ13956 83 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 MLANAQ16655 118 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 LGALS9BQ3B8N2 356 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 MORN5Q5VZ52 161 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 LGALS9CQ6DKI2 356 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 C16orf54Q6UWD8 224 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 AAMDCQ9H7C9 122 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 F11RQ9Y624 299 aaKnown RBP4.91□□□□□ -1.62
HERC4-209ENST00000473533 SPTBN1Q01082 2364 aaKnown RBP4.91□□□□□ -1.62
HERC4-209ENST00000473533 A0A1W2PPI3 338 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 SLC25A17O43808 307 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 IGLV2-23P01705 113 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 HOXA4Q00056 320 aaPredicted RBP4.91□□□□□ -1.62
HERC4-209ENST00000473533 HSD52Q0P140 79 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 OR5A1Q8NGJ0 315 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 RNASE8Q8TDE3 154 aaKnown RBP4.91□□□□□ -1.62
HERC4-209ENST00000473533 CST9LQ9H4G1 147 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 KAAG1Q9UBP8 84 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 LOC105371242A0A075B767 164 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 H3BRM9 83 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 K7EM74 188 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 RBP4P02753 201 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 HOXB4P17483 251 aaPredicted RBP4.91□□□□□ -1.62
HERC4-209ENST00000473533 CEACAM3P40198 252 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 C21orf62-AS1Q17RA5 79 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 MAJINQ3KP22 176 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 OCIAD2Q56VL3 154 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 TMEM97Q5BJF2 176 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 TMEM200BQ69YZ2 307 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 ST6GALNAC6Q969X2 333 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 NPFFR1Q9GZQ6 430 aa4.91□□□□□ -1.62
HERC4-209ENST00000473533 GAGE10A6NGK3 116 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 SHISA9B4DS77 424 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 ENSAO43768 121 aaKnown RBP4.9□□□□□ -1.62
HERC4-209ENST00000473533 APOHP02749 345 aaPredicted RBP4.9□□□□□ -1.62
HERC4-209ENST00000473533 LYZP61626 148 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 PSG9Q00887 426 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 MSMPQ1L6U9 139 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 RNF151Q2KHN1 245 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 FAM201AQ5SY85 155 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 ATP1A1-AS1Q5TC04 95 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 ALKBH2Q6NS38 261 aa4.9□□□□□ -1.62
HERC4-209ENST00000473533 ZNF474Q6S9Z5 364 aaPredicted RBP4.9□□□□□ -1.62
HERC4-209ENST00000473533 ZNF493Q6ZR52 646 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms