RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 NPSP0C0P6 89 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 SAA2P0DJI9 122 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 IGFBP3P17936 291 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 MC5RP33032 325 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 CNN1P51911 297 aaKnown RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 CRIP2P52943 208 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 RBX1P62877 108 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 HTD2P86397 168 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 NDPQ00604 133 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 SLC25A24Q6NUK1 477 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 GLIPR1L1Q6UWM5 242 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF66Q6ZN08 573 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF833PQ6ZTB9 187 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 PPP1R27Q86WC6 154 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 ODF3L1Q8IXM7 274 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 CCDC71LQ8N9Z2 235 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 OR4C5Q8NGB2 326 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 OR2G3Q8NGZ4 309 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 OR4X1Q8NH49 305 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 KCNG3Q8TAE7 436 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 MARCH1Q8TCQ1 289 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 IL1F10Q8WWZ1 152 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 RGP1Q92546 391 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 YPEL2Q96QA6 119 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 VPS25Q9BRG1 176 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 FAM103A1Q9BTL3 118 aaKnown RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 RBKSQ9H477 322 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 MBNL3Q9NUK0 354 aaKnown RBP5.3□□□□□ -1.56
CKS1B-205ENST00000473344 UQCR10Q9UDW1 63 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 AK3Q9UIJ7 227 aa5.3□□□□□ -1.56
CKS1B-205ENST00000473344 KIAA2026Q5HYC2 2103 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 TRAV8-7A0A075B6U6 113 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 TRAV30A0A087WSZ9 112 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 TGIF2-C20orf24A0A0A6YYL0 155 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 A0A0G2JLM5 398 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 LOC102723971A0A1B0GUV8 181 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 MEIS3P1A6NDR6 274 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 FAM90A7PA6NKC0 464 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 FAM90A23PA8MXZ1 464 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 FCN1O00602 326 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 RAB29O14966 203 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 SLC25A17O43808 307 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 CDS2O95674 445 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 TOMM40O96008 361 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 HRASP01112 189 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 IFNA5P01569 189 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 SCGB1A1P11684 91 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 FUT3P21217 361 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 RND3P61587 244 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 C19orf54Q5BKX5 351 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 LCN12Q6JVE5 192 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 FAM71F2Q6NXP2 309 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF562Q6V9R5 426 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 TEX43Q6ZNM6 134 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 LINC01551Q86U37 167 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 LGI3Q8N145 548 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 GAPTQ8N292 157 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 MTURNQ8N3F0 131 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 GBGT1Q8N5D6 347 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 LRTM2Q8N967 370 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 OR9G4Q8NGQ1 327 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 PINX1Q96BK5 328 aaKnown RBP5.29□□□□□ -1.56
CKS1B-205ENST00000473344 ALKBH7Q9BT30 221 aaPredicted RBP5.29□□□□□ -1.56
CKS1B-205ENST00000473344 MAGT1Q9H0U3 335 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 BANF2Q9H503 90 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 WASHC3Q9Y3C0 194 aa5.29□□□□□ -1.56
CKS1B-205ENST00000473344 LSM5Q9Y4Y9 91 aaKnown RBP5.29□□□□□ -1.56
CKS1B-205ENST00000473344 TMEM250H0YL14 139 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 PDCD6O75340 191 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 CNIH1O95406 144 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 CA2P00918 260 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 EGR2P11161 476 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-205ENST00000473344 SYNJ2BPP57105 145 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 ICAM4Q14773 271 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 TMEM182Q6ZP80 229 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-205ENST00000473344 C5orf24Q7Z6I8 188 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 LHFPL1Q86WI0 220 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 FAM219AQ8IW50 185 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 CMTM1Q8IZ96 169 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 ADAD2Q8NCV1 583 aaKnown RBP5.28□□□□□ -1.56
CKS1B-205ENST00000473344 MRPL30Q8TCC3 161 aaKnown RBP5.28□□□□□ -1.56
CKS1B-205ENST00000473344 OR10C1Q96KK4 312 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 RNF5Q99942 180 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 IFI27L2Q9H2X8 130 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 C5orf66Q9H5L9 145 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 SDF2L1Q9HCN8 221 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 SLC35D1Q9NTN3 355 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 ZNF586Q9NXT0 402 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 SLC45A2Q9UMX9 530 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 URGCP-MRPS24S4R325 110 aa5.28□□□□□ -1.56
CKS1B-205ENST00000473344 ALMS1Q8TCU4 4167 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 ZNF727A8MUV8 499 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 H0YJW9 148 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 H3BUA1 57 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 CT45A6P0DMU7 189 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 CT45A5P0DMU8 189 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 CT45A7P0DMV0 189 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 BCL2P10415 239 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 ESDP10768 282 aa5.27□□□□□ -1.57
CKS1B-205ENST00000473344 HIST1H1DP16402 221 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms