RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ZNF141Q15928 474 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 MEIG1Q5JSS6 88 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
RTF1-203ENST00000473214 TMEM14EPQ6UXP3 125 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 ZNF497Q6ZNH5 498 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 PDPNQ86YL7 162 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 LINC01555Q8NAE3 123 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 OR5H2Q8NGV7 314 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 ITLN1Q8WWA0 313 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 DEDD2Q8WXF8 326 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 ELSPBP1Q96BH3 223 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 OR4C12Q96R67 309 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 SYT15Q9BQS2 421 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 TCEAL2Q9H3H9 227 aaPredicted RBP4.39□□□□□ -1.71
RTF1-203ENST00000473214 CBLN4Q9NTU7 201 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 TAC3Q9UHF0 121 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 PCDH15Q96QU1 1955 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 ATMQ13315 3056 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 COL1A2P08123 1366 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 MYO16Q9Y6X6 1858 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 IGHV1-45A0A0A0MS14 117 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 IGHV3-74A0A0B4J1X5 117 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 A8MXK9 166 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 LTAP01374 205 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 HLA-EP13747 358 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 HOXC5Q00444 222 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 MSMO1Q15800 293 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 RSPO1Q2MKA7 263 aaPredicted RBP4.38□□□□□ -1.71
RTF1-203ENST00000473214 ADAMTSL4-AS1Q5T5F5 129 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 C1orf140Q5VVS0 124 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 LAIR2Q6ISS4 152 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 ZNF555Q8NEP9 628 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 FAM57AQ8TBR7 257 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 RPS4Y2Q8TD47 263 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 RERGLQ9H628 205 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 ZNF492Q9P255 531 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 CACNG5Q9UF02 275 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 PYGO1Q9Y3Y4 419 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 MGAQ8IWI9 3026 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 PTPRDP23468 1912 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 THADAQ6YHU6 1953 aa4.38□□□□□ -1.71
RTF1-203ENST00000473214 ZNF106Q9H2Y7 1883 aaKnown RBP4.37□□□□□ -1.71
RTF1-203ENST00000473214 PTPRQQ9UMZ3 2332 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 IGLV8-61A0A075B6I0 122 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 IGLL5B9A064 214 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 H0YJW9 148 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 H3BQF6 201 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 LY6LH3BQJ8 138 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 I3L521 148 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 TAX1BP3O14907 124 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 NCR2O95944 276 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 SEC11BP0C7V7 166 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 BRS3P32247 399 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 DSCR9P59020 149 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 RHOGP84095 191 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 HSD52Q0P140 79 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 RRN3P1Q2M238 152 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 LINC00303Q3SY05 128 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 SP6Q3SY56 376 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 CASC10Q5T4H9 136 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 SLC25A34Q6PIV7 304 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 LCA10Q71F78 164 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 NR2C2APQ86WQ0 139 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 OR5D14Q8NGL3 314 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 OR5C1Q8NGR4 320 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 PLEKHF2Q9H8W4 249 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 ZNF556Q9HAH1 456 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 CA10Q9NS85 328 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 MARCOQ9UEW3 520 aaPredicted RBP4.37□□□□□ -1.71
RTF1-203ENST00000473214 MYO9AB2RTY4 2548 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 DOPEY2Q9Y3R5 2298 aa4.37□□□□□ -1.71
RTF1-203ENST00000473214 UBR5O95071 2799 aaPredicted RBP4.36□□□□□ -1.71
RTF1-203ENST00000473214 DYSFO75923 2080 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 RELNP78509 3460 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 A0A0J9YXY3 114 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 PNMA8CA0A1B0GUJ8 204 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 ARRDC5A6NEK1 342 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 C1orf196B1AJZ1 125 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 ZNF73O43830 326 aaPredicted RBP4.36□□□□□ -1.71
RTF1-203ENST00000473214 OR2T1O43869 369 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 FABP2P12104 132 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 ELK1P19419 428 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 TMBIM6P55061 237 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 CXCL6P80162 114 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 HES1Q14469 280 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 PDGFRLQ15198 375 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 RPL22L1Q6P5R6 122 aaKnown RBP4.36□□□□□ -1.71
RTF1-203ENST00000473214 LINC00305Q7Z4B0 112 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 GKN2Q86XP6 184 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 OR4K5Q8NGD3 323 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 C2orf15Q8WU43 125 aaKnown RBP4.36□□□□□ -1.71
RTF1-203ENST00000473214 NEUROG1Q92886 237 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 MAGOHBQ96A72 148 aaKnown RBP4.36□□□□□ -1.71
RTF1-203ENST00000473214 GGTLC1Q9BX51 225 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 LINC00597Q9H2U6 94 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 SND1-IT1Q9HBX3 110 aa4.36□□□□□ -1.71
RTF1-203ENST00000473214 TSC2P49815 1807 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms