RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
UBXN11-213ENST00000472155 GATCO43716 136 aaKnown RBP11.86□□□□□ -0.51
UBXN11-213ENST00000472155 CX3CL1P78423 397 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
UBXN11-213ENST00000472155 C5orf64Q2M2E5 130 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 SLC25A39Q9BZJ4 359 aaPredicted RBP11.86□□□□□ -0.51
UBXN11-213ENST00000472155 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 VWC2LB2RUY7 222 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 M0R1W7 72 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 NDUFA3O95167 84 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 RASL11BQ9BPW5 248 aa11.86□□□□□ -0.51
UBXN11-213ENST00000472155 SH2D7A6NKC9 451 aaPredicted RBP11.85□□□□□ -0.51
UBXN11-213ENST00000472155 MRPL41Q8IXM3 137 aaKnown RBP11.85□□□□□ -0.51
UBXN11-213ENST00000472155 RBM14Q96PK6 669 aaKnown RBP11.85□□□□□ -0.51
UBXN11-213ENST00000472155 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 Q9H3A6 140 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 C7orf69Q9H7B7 122 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 POLQO75417 2590 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 RAB4BP61018 213 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 NPBQ8NG41 125 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
UBXN11-213ENST00000472155 SMIM27A0A1W2PRY6 76 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 SERF1AO75920 110 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 TAS2R60P59551 318 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 GDF5OSQ5U4N7 250 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 NAT8BQ9UHF3 227 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 ZANQ9Y493 2812 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 PAX2Q02962 417 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 AJUBAQ96IF1 538 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 RNF5Q99942 180 aa11.84□□□□□ -0.51
UBXN11-213ENST00000472155 RNF224P0DH78 156 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 CRISP2P16562 243 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 PLP1P60201 277 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 RNF114Q9Y508 228 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
UBXN11-213ENST00000472155 CEACAM3P40198 252 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 TMEM18Q96B42 140 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 MBD6Q96DN6 1003 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 SIRPDQ9H106 197 aa11.83□□□□□ -0.52
UBXN11-213ENST00000472155 MRPL27Q9P0M9 148 aaKnown RBP11.83□□□□□ -0.52
UBXN11-213ENST00000472155 IL4P05112 153 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 UBE2G1P62253 170 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 ZNF664Q8N3J9 261 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 RCHY1Q96PM5 261 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 GNB4Q9HAV0 340 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 DOPEY1Q5JWR5 2465 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 EGR2P11161 476 aaPredicted RBP11.82□□□□□ -0.52
UBXN11-213ENST00000472155 SLAQ13239 276 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
UBXN11-213ENST00000472155 ZNF491Q8N8L2 437 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 TBX15Q96SF7 602 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 HSPB9Q9BQS6 159 aa11.82□□□□□ -0.52
UBXN11-213ENST00000472155 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 TCRAP04437 139 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 TCF24Q7RTU0 167 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 Q8N6K4 173 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 NUP35Q8NFH5 326 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 SSBP4Q9BWG4 385 aaPredicted RBP11.81□□□□□ -0.52
UBXN11-213ENST00000472155 NDUFB8O95169 186 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 LMO4P61968 165 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 DEFA6Q01524 100 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 CIARTQ8N365 385 aaPredicted RBP11.81□□□□□ -0.52
UBXN11-213ENST00000472155 CMTM2Q8TAZ6 248 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 ARPC1AQ92747 370 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 NEU1Q99519 415 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
UBXN11-213ENST00000472155 TRAV9-1A0A075B6T8 112 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 A0A1B0GV90 55 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 LINC01548A6NM66 108 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 BMPR1BO00238 502 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 OR2J3O76001 311 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 GOLT1AQ6ZVE7 132 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 Q6ZWC4 215 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 STXBP6Q8NFX7 210 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 MLST8Q9BVC4 326 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 KLF12Q9Y4X4 402 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■■■□ 21.5
UBXN11-213ENST00000472155 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 FCGR2BP31994 310 aaPredicted RBP11.8□□□□□ -0.52
UBXN11-213ENST00000472155 ZNF562Q6V9R5 426 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 OR5R1Q8NH85 324 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
UBXN11-213ENST00000472155 USP9YO00507 2555 aaPredicted RBP11.8□□□□□ -0.52
UBXN11-213ENST00000472155 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 ZNF785A8K8V0 405 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 M0R3E3 92 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 TMEM11P17152 192 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 EFNA4P52798 201 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 BAGE3Q86Y29 109 aa11.79□□□□□ -0.52
UBXN11-213ENST00000472155 C5orf17Q8NAS9 161 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms