RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
CDHR3-209ENST00000472116 PYDC1Q8WXC3 89 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 TMPRSS5Q9H3S3 457 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 TRGV2A0A075B6R0 118 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 TOMM40O96008 361 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 RHOBP62745 196 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 SUPT4H1P63272 117 aaKnown RBP6.84□□□□□ -1.31
CDHR3-209ENST00000472116 SPHARQ15513 63 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 OR8G2PQ6IF36 304 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 OR8I2Q8N0Y5 310 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 SLC24A4Q8NFF2 622 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 OR51G1Q8NGK1 321 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 DPH3P1Q9H4G8 78 aa6.84□□□□□ -1.31
CDHR3-209ENST00000472116 A0A0U1RQV1 116 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 IFITM5A6NNB3 132 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 INS-IGF2F8WCM5 200 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 H7BYZ3 331 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 SSX5O60225 188 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 IGLV2-8P01709 118 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 ETFRF1Q6IPR1 90 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 LYPD5Q6UWN5 251 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 SEC22AQ96IW7 307 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
CDHR3-209ENST00000472116 SLC25A39Q9BZJ4 359 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-209ENST00000472116 RRP15Q9Y3B9 282 aaKnown RBP6.83□□□□□ -1.32
CDHR3-209ENST00000472116 GPR31O00270 319 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 HSMCR30P0CW71 290 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 GALR1P47211 349 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 MRPL23Q16540 153 aaKnown RBP6.82□□□□□ -1.32
CDHR3-209ENST00000472116 PRSS54Q6PEW0 395 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 TMEM91Q6ZNR0 172 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 WFDC10BQ8IUB3 73 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 MRGPRFQ96AM1 343 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 C20orf173Q96LM9 149 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 PSORS1C1Q9UIG5 152 aa6.82□□□□□ -1.32
CDHR3-209ENST00000472116 FCER2P06734 321 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 PSG1P11464 419 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 MYL9P24844 172 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 HTR2BP41595 481 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 TDRG1Q3Y452 100 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 NEGR1Q7Z3B1 354 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 HOGA1Q86XE5 327 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 OR5AP2Q8NGF4 316 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 OR52E5Q8NH55 327 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 CIRBP-AS1Q8TBR5 109 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 CYGBQ8WWM9 190 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 TMEM37Q8WXS4 190 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 ACY3Q96HD9 319 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 SSBP4Q9BWG4 385 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-209ENST00000472116 DIABLOQ9NR28 239 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 EHFQ9NZC4 300 aa6.81□□□□□ -1.32
CDHR3-209ENST00000472116 RCL1Q9Y2P8 373 aaKnown RBP6.81□□□□□ -1.32
CDHR3-209ENST00000472116 AKR1C2P52895 323 aa6.8□□□□□ -1.32
CDHR3-209ENST00000472116 HIST1H1AQ02539 215 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-209ENST00000472116 ZFP1Q6P2D0 407 aa6.8□□□□□ -1.32
CDHR3-209ENST00000472116 Q6ZRU5 148 aa6.8□□□□□ -1.32
CDHR3-209ENST00000472116 ZNF738Q8NE65 137 aa6.8□□□□□ -1.32
CDHR3-209ENST00000472116 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
CDHR3-209ENST00000472116 C20orf144Q9BQM9 153 aa6.8□□□□□ -1.32
CDHR3-209ENST00000472116 ZNF2Q9BSG1 426 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-209ENST00000472116 Q9HAA7 133 aa6.8□□□□□ -1.32
CDHR3-209ENST00000472116 TNXBP22105 4242 aa6.8□□□□□ -1.32
CDHR3-209ENST00000472116 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-209ENST00000472116 ZNF324O75467 553 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-209ENST00000472116 ATG12O94817 140 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 IGLV2-11P01706 119 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 FABP1P07148 127 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 RAB3BP20337 219 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 SRIP30626 198 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 CDKN1BP46527 198 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 TAS2R20P59543 309 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 LYZP61626 148 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 SLAQ13239 276 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 PHLDA2Q53GA4 152 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 Q6ZTI0 123 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 NPIPB3Q92617 1050 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 ACOT13Q9NPJ3 140 aa6.79□□□□□ -1.32
CDHR3-209ENST00000472116 ANKRD65E5RJM6 399 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 OR5AC1P0C628 307 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
CDHR3-209ENST00000472116 FABP5Q01469 135 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 ZNF415Q09FC8 603 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 LPCAT3Q6P1A2 487 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 RNASE11Q8TAA1 199 aaKnown RBP6.78□□□□□ -1.32
CDHR3-209ENST00000472116 PCNPQ8WW12 178 aaKnown RBP6.78□□□□□ -1.32
CDHR3-209ENST00000472116 DAZAP1Q96EP5 407 aaKnown RBP6.78□□□□□ -1.32
CDHR3-209ENST00000472116 RRNAD1Q96FB5 475 aaKnown RBP6.78□□□□□ -1.32
CDHR3-209ENST00000472116 RSG1Q9BU20 258 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 TM2D2Q9BX73 214 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 HEYLQ9NQ87 328 aaPredicted RBP6.78□□□□□ -1.32
CDHR3-209ENST00000472116 IFT46Q9NQC8 304 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 PRO0255Q9UI72 69 aa6.78□□□□□ -1.32
CDHR3-209ENST00000472116 TRAV1-2A0A0B4J238 106 aa6.77□□□□□ -1.33
CDHR3-209ENST00000472116 ZFP92A6NM28 416 aa6.77□□□□□ -1.33
CDHR3-209ENST00000472116 S100A7P31151 101 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms