RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FOXA3P55318 350 aaPredicted RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 C8orf86Q6ZUL3 223 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 ORMDL3Q8N138 153 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 COL4A6Q14031 1691 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 RASL10AQ92737 203 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 GGTLC1Q9BX51 225 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 TRAV2A0A0B4J234 112 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 LINC00271P0C7V0 271 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 FABP2P12104 132 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 DUTP33316 252 aaKnown RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 IGFL4Q6B9Z1 124 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 Q6ZNX1 250 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 C17orf82Q86X59 251 aaPredicted RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 ALX4Q9H161 411 aaPredicted RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 SMAD5-AS1Q9Y6J3 95 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 WISP3O95389 354 aaPredicted RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 SMIM13P0DJ93 91 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 GRNP28799 593 aaKnown RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 SUPT4H1P63272 117 aaKnown RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 NUP214P35658 2090 aaPredicted RBP6.99□□□□□ -1.29
CD47-204ENST00000471694 ZNF98A6NK75 572 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 PMS2P5A8MQ11 134 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 ZNF138P52744 262 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 SPATA45Q537H7 98 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 SCRT1Q9BWW7 348 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 KLK9Q9UKQ9 250 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 ARID2Q68CP9 1835 aa6.99□□□□□ -1.29
CD47-204ENST00000471694 A0A1B0GWJ7 208 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 IGLL5B9A064 214 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 CD300EQ496F6 205 aaPredicted RBP6.98□□□□□ -1.29
CD47-204ENST00000471694 TEX43Q6ZNM6 134 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 MARVELD1Q9BSK0 173 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 MIXL1Q9H2W2 232 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 SIGLEC9Q9Y336 463 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 A0A1B0GW15 77 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 IGHV4-39P01824 125 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 PAX2Q02962 417 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 TRBV6-7A0A0A0MS04 114 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 LSM4Q9Y4Z0 139 aaKnown RBP6.98□□□□□ -1.29
CD47-204ENST00000471694 MYO7BQ6PIF6 2116 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 DKK1O94907 266 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 FAM169BQ8N8A8 192 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 FRMPD3Q5JV73 1810 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 INAFM1C9JVW0 142 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 F8VVB4 439 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 F8VWA3 439 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 G3V318 75 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 IGKV1D-12P01611 117 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
CD47-204ENST00000471694 RASL11AQ6T310 242 aa6.98□□□□□ -1.29
CD47-204ENST00000471694 A0A087WWL8 130 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 ELANEP08246 267 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 RND3P61587 244 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 DEFB136Q30KP8 78 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 C1QL4Q86Z23 238 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 EPDR1Q9UM22 224 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 RTTNQ86VV8 2226 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 F2Z2F3 143 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 ANGP03950 147 aaKnown RBP6.97□□□□□ -1.29
CD47-204ENST00000471694 TMEM95Q3KNT9 176 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 CLPSL2Q6UWE3 100 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 CHTOPQ9Y3Y2 248 aaKnown RBP6.97□□□□□ -1.29
CD47-204ENST00000471694 RP1P56715 2156 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 C7orf77A4D0Y5 90 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 GAGE6Q13070 117 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 PRORYQ9H606 182 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 CXCL3P19876 107 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 PSG3Q16557 428 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 SLC25A2Q9BXI2 301 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 CCL1P22362 96 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 HGFACQ04756 655 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 V9GYH0 126 aa6.97□□□□□ -1.29
CD47-204ENST00000471694 RPL18AQ02543 176 aaKnown RBP6.96□□□□□ -1.29
CD47-204ENST00000471694 OR2K2Q8NGT1 345 aa6.96□□□□□ -1.29
CD47-204ENST00000471694 NDUFS7O75251 213 aa6.96□□□□□ -1.29
CD47-204ENST00000471694 ORMDL2Q53FV1 153 aa6.96□□□□□ -1.29
CD47-204ENST00000471694 CRIPAKQ8N1N5 446 aa6.96□□□□□ -1.29
CD47-204ENST00000471694 STPG2Q8N412 459 aa6.96□□□□□ -1.29
CD47-204ENST00000471694 OR11H7Q8NGC8 314 aa6.96□□□□□ -1.29
CD47-204ENST00000471694 THSD7BQ9C0I4 1608 aa6.96□□□□□ -1.29
CD47-204ENST00000471694 K7EM74 188 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 EFNB3Q15768 340 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 PPP1R3EQ9H7J1 279 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 HLA-DQB1P01920 261 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 KIAA1671Q9BY89 1806 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 TRBV9A0A0B4J1U6 114 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 ALX3O95076 343 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 IGHV2-5P01817 119 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 RNF144BQ7Z419 303 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 EXOC3-AS1Q8N2X6 119 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 ZNF843Q8N446 348 aa6.96□□□□□ -1.3
CD47-204ENST00000471694 SLAQ13239 276 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 IRF3Q14653 427 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 ARHGEF17Q96PE2 2063 aaPredicted RBP6.95□□□□□ -1.3
CD47-204ENST00000471694 IGKV1D-17A0A075B6S4 117 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 DUX4L9Q6RFH8 374 aaPredicted RBP6.95□□□□□ -1.3
CD47-204ENST00000471694 C10orf126Q8N4M7 172 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 SLC17A3O00476 420 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 ZNF345Q14585 488 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 HIST2H2BCQ6DN03 193 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms