RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 C8GP07360 202 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 RPS17P08708 135 aaKnown RBP0.05□□□□□ -2.4
RBM39-228ENST00000471635 OMPP47874 163 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 SPINK9Q5DT21 86 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 HAGHLQ6PII5 290 aaPredicted RBP0.05□□□□□ -2.4
RBM39-228ENST00000471635 OR52L1Q8NGH7 329 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 FAM172AQ8WUF8 416 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 TP53RKQ96S44 253 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 TMEM126AQ9H061 195 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 NIT2Q9NQR4 276 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.05□□□□□ -2.4
RBM39-228ENST00000471635 PLAC8Q9NZF1 115 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 OBSL1O75147 1896 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 MYH7BA7E2Y1 1941 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 ADCY9O60503 1353 aa0.05□□□□□ -2.4
RBM39-228ENST00000471635 CECR2Q9BXF3 1484 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 J3QRK9 145 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 TCRBP04435 133 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 LSM6P62312 80 aaKnown RBP0.04□□□□□ -2.4
RBM39-228ENST00000471635 EIF5AP63241 154 aaKnown RBP0.04□□□□□ -2.4
RBM39-228ENST00000471635 AESQ08117 197 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 EDDM3AQ14507 147 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 PDZD9Q8IXQ8 264 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 OR51A2Q8NGJ7 313 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 GLTPQ9NZD2 209 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 PCTPQ9UKL6 214 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 TNFSF18Q9UNG2 199 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 ASH1LQ9NR48 2969 aaKnown RBP0.04□□□□□ -2.4
RBM39-228ENST00000471635 RTL1A6NKG5 1358 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 CCDC144AA2RUR9 1427 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 KDM6AO15550 1401 aaPredicted RBP0.04□□□□□ -2.4
RBM39-228ENST00000471635 ZFYVE9O95405 1425 aa0.04□□□□□ -2.4
RBM39-228ENST00000471635 ARHGEF11O15085 1522 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 TRAV10A0A0B4J240 114 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 SMIM23A6NLE4 172 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 PDE6DO43924 150 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 NIPSNAP2O75323 286 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 SRP14P37108 136 aaKnown RBP0.03□□□□□ -2.4
RBM39-228ENST00000471635 HIST1H3AP68431 136 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 H3F3AP84243 136 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 PTRHD1Q6GMV3 140 aaKnown RBP0.03□□□□□ -2.4
RBM39-228ENST00000471635 C2orf82Q6UX34 121 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 OR8J2Q8NGG1 315 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 OR10K1Q8NGX5 313 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 Q8TAT8 98 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 LINC00467Q9BRT7 94 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 TRIM4Q9C037 500 aa0.03□□□□□ -2.4
RBM39-228ENST00000471635 NCOA1Q15788 1441 aa0.03□□□□□ -2.41
RBM39-228ENST00000471635 TNCP24821 2201 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 SIP14410 1827 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
RBM39-228ENST00000471635 IGLV3-32A0A0A0MS00 114 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 TRAV4A0A0B4J268 109 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 A8MWV9 139 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 E7EUB6 86 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 NDUFB3O43676 98 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 RPP14O95059 124 aaKnown RBP0.02□□□□□ -2.41
RBM39-228ENST00000471635 HAND1O96004 215 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 SERPINB9P50453 376 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 DSCR4P56555 118 aaPredicted RBP0.02□□□□□ -2.41
RBM39-228ENST00000471635 PIGPP57054 158 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 KRR1Q13601 381 aaKnown RBP0.02□□□□□ -2.41
RBM39-228ENST00000471635 TMEM97Q5BJF2 176 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 C22orf39Q6P5X5 142 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 C4orf22Q6V702 233 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 OR5D14Q8NGL3 314 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 PSMF1Q92530 271 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 ZC2HC1AQ96GY0 325 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 LYSMD1Q96S90 227 aa0.02□□□□□ -2.41
RBM39-228ENST00000471635 SYNE1Q8NF91 8797 aaKnown RBP0.02□□□□□ -2.41
RBM39-228ENST00000471635 FSIP2Q5CZC0 6907 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 TRGV10A0A0A0MS01 117 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 F8W1H4 67 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 FOXA3P55318 350 aaPredicted RBP0.01□□□□□ -2.41
RBM39-228ENST00000471635 SPINK7P58062 85 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 RRN3P1Q2M238 152 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 LYRM7Q5U5X0 104 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 GLIPR1L1Q6UWM5 242 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 EXOC3-AS1Q8N2X6 119 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 ARL5BQ96KC2 179 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 SLC25A21Q9BQT8 299 aaPredicted RBP0.01□□□□□ -2.41
RBM39-228ENST00000471635 LY96Q9Y6Y9 160 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 BDP1A6H8Y1 2624 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 FANCMQ8IYD8 2048 aa0.01□□□□□ -2.41
RBM39-228ENST00000471635 H3BRM9 83 aa0□□□□□ -2.41
RBM39-228ENST00000471635 KIF1BO60333 1816 aa0□□□□□ -2.41
RBM39-228ENST00000471635 ERC2-IT1O76042 136 aa0□□□□□ -2.41
RBM39-228ENST00000471635 FREM3P0C091 2139 aa0□□□□□ -2.41
RBM39-228ENST00000471635 CXCL8P10145 99 aa0□□□□□ -2.41
RBM39-228ENST00000471635 KNTC1P50748 2209 aa0□□□□□ -2.41
RBM39-228ENST00000471635 C1orf134Q5TEV5 83 aa0□□□□□ -2.41
RBM39-228ENST00000471635 FMN1Q68DA7 1419 aa0□□□□□ -2.41
RBM39-228ENST00000471635 PLB1Q6P1J6 1458 aa0□□□□□ -2.41
RBM39-228ENST00000471635 TEN1Q86WV5 123 aa0□□□□□ -2.41
RBM39-228ENST00000471635 ZGRF1Q86YA3 2104 aa0□□□□□ -2.41
RBM39-228ENST00000471635 YPEL2Q96QA6 119 aa0□□□□□ -2.41
RBM39-228ENST00000471635 FAM103A1Q9BTL3 118 aaKnown RBP0□□□□□ -2.41
RBM39-228ENST00000471635 PARVBQ9HBI1 364 aa0□□□□□ -2.41
RBM39-228ENST00000471635 TMEM138Q9NPI0 162 aa0□□□□□ -2.41
RBM39-228ENST00000471635 RFX7Q2KHR2 1363 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms