RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 USMG5Q96IX5 58 aa20.15■□□□□ 0.82
U2AF1-208ENST00000471250 PUS1Q9Y606 427 aaKnown RBP eCLIP20.15■□□□□ 0.82
U2AF1-208ENST00000471250 FASNP49327 2511 aaKnown RBP20.14■□□□□ 0.82
U2AF1-208ENST00000471250 H3BQ15 152 aa20.14■□□□□ 0.81
U2AF1-208ENST00000471250 H3BRN7 92 aa20.14■□□□□ 0.81
U2AF1-208ENST00000471250 USF2Q15853 346 aaPredicted RBP20.14■□□□□ 0.81
U2AF1-208ENST00000471250 TMEM95Q3KNT9 176 aa20.14■□□□□ 0.81
U2AF1-208ENST00000471250 FXYD5Q96DB9 178 aa20.14■□□□□ 0.81
U2AF1-208ENST00000471250 ZNF414Q96IQ9 312 aa20.14■□□□□ 0.81
U2AF1-208ENST00000471250 SHANK2-AS3Q9BTD1 123 aa20.14■□□□□ 0.81
U2AF1-208ENST00000471250 ZNF702PQ9H963 129 aa20.14■□□□□ 0.81
U2AF1-208ENST00000471250 NIPSNAP3BQ9BS92 247 aa20.13■□□□□ 0.81
U2AF1-208ENST00000471250 A0A1W2PRE2 83 aa20.13■□□□□ 0.81
U2AF1-208ENST00000471250 TGOLN2O43493 480 aa20.13■□□□□ 0.81
U2AF1-208ENST00000471250 PF4V1P10720 104 aa20.13■□□□□ 0.81
U2AF1-208ENST00000471250 HNF1AP20823 631 aa20.13■□□□□ 0.81
U2AF1-208ENST00000471250 NPPCP23582 126 aa20.13■□□□□ 0.81
U2AF1-208ENST00000471250 S100A7AQ86SG5 101 aa20.13■□□□□ 0.81
U2AF1-208ENST00000471250 GP9P14770 177 aa20.12■□□□□ 0.81
U2AF1-208ENST00000471250 FAM74A3Q4VXF1 159 aa20.12■□□□□ 0.81
U2AF1-208ENST00000471250 LEMD1Q68G75 181 aa20.12■□□□□ 0.81
U2AF1-208ENST00000471250 KLK15Q9H2R5 256 aa20.12■□□□□ 0.81
U2AF1-208ENST00000471250 TMEM14CQ9P0S9 112 aa20.12■□□□□ 0.81
U2AF1-208ENST00000471250 AKAP9Q99996 3911 aa20.12■□□□□ 0.81
U2AF1-208ENST00000471250 ZNF727A8MUV8 499 aa20.11■□□□□ 0.81
U2AF1-208ENST00000471250 RPUSD4Q96CM3 377 aaKnown RBP20.11■□□□□ 0.81
U2AF1-208ENST00000471250 PARLQ9H300 379 aa20.11■□□□□ 0.81
U2AF1-208ENST00000471250 TMEM160Q9NX00 188 aa20.11■□□□□ 0.81
U2AF1-208ENST00000471250 M0R036 132 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 IGHG4P01861 327 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 BTN1A1Q13410 526 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 AWAT1Q58HT5 328 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 ZNF343Q6P1L6 599 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 TVP23CQ96ET8 276 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 FLNAP21333 2647 aaKnown RBP20.1■□□□□ 0.81
U2AF1-208ENST00000471250 HECTD1Q9ULT8 2610 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 TMEM89A2RUT3 159 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 RAB9AP51151 201 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 DUX5Q96PT3 197 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 SMIM7Q9BQ49 75 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 GNB4Q9HAV0 340 aa20.1■□□□□ 0.81
U2AF1-208ENST00000471250 A0A0G2JLM5 398 aa20.09■□□□□ 0.81
U2AF1-208ENST00000471250 ZNF674Q2M3X9 581 aa20.09■□□□□ 0.81
U2AF1-208ENST00000471250 TOMM20LQ6UXN7 152 aa20.09■□□□□ 0.81
U2AF1-208ENST00000471250 Q8N2B8 174 aa20.09■□□□□ 0.81
U2AF1-208ENST00000471250 C11orf52Q96A22 123 aa20.09■□□□□ 0.81
U2AF1-208ENST00000471250 C20orf24Q9BUV8 137 aa20.09■□□□□ 0.81
U2AF1-208ENST00000471250 SCO2A0A1W2PP80 73 aa20.08■□□□□ 0.81
U2AF1-208ENST00000471250 ZFAND3Q9H8U3 227 aa20.08■□□□□ 0.81
U2AF1-208ENST00000471250 SDF2L1Q9HCN8 221 aa20.08■□□□□ 0.81
U2AF1-208ENST00000471250 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.07■□□□□ 0.8
U2AF1-208ENST00000471250 ZNF98A6NK75 572 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 GGTLC3B5MD39 225 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 BMPR1BO00238 502 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 NBEAP1P0C6P0 100 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 PSMB8P28062 276 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 RELQ04864 619 aaPredicted RBP20.07■□□□□ 0.8
U2AF1-208ENST00000471250 ZNF329Q86UD4 541 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 RABAC1Q9UI14 185 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 IGHV3-35A0A0C4DH35 117 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 C7orf77A4D0Y5 90 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 DNASE2O00115 360 aaPredicted RBP20.07■□□□□ 0.8
U2AF1-208ENST00000471250 NDUFB4O95168 129 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 RHEBQ15382 184 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 NAT8Q9UHE5 227 aa20.07■□□□□ 0.8
U2AF1-208ENST00000471250 PPP5D1E7EU14 171 aa20.06■□□□□ 0.8
U2AF1-208ENST00000471250 HIST1H1EP10412 219 aaKnown RBP20.06■□□□□ 0.8
U2AF1-208ENST00000471250 SUMO1P63165 101 aaKnown RBP20.06■□□□□ 0.8
U2AF1-208ENST00000471250 PNRC1Q12796 327 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-208ENST00000471250 BPIFA4PQ86YQ2 179 aa20.06■□□□□ 0.8
U2AF1-208ENST00000471250 S100A7P31151 101 aa20.05■□□□□ 0.8
U2AF1-208ENST00000471250 ARL3P36405 182 aa20.05■□□□□ 0.8
U2AF1-208ENST00000471250 TMEM241Q24JQ0 296 aa20.05■□□□□ 0.8
U2AF1-208ENST00000471250 LCNL1Q6ZST4 164 aa20.05■□□□□ 0.8
U2AF1-208ENST00000471250 RPS10P5Q9NQ39 176 aa20.05■□□□□ 0.8
U2AF1-208ENST00000471250 DNAJC9-AS1A6NH13 148 aa20.04■□□□□ 0.8
U2AF1-208ENST00000471250 BLNKQ8WV28 456 aa20.04■□□□□ 0.8
U2AF1-208ENST00000471250 RNF24Q9Y225 148 aa20.04■□□□□ 0.8
U2AF1-208ENST00000471250 MRPS12O15235 138 aaKnown RBP20.03■□□□□ 0.8
U2AF1-208ENST00000471250 IGHV3-11P01762 117 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 MYCNOSP40205 109 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 SLC35B1P78383 322 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 SCGB2A2Q13296 93 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 OR4X2Q8NGF9 303 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 ELOVL1Q9BW60 279 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 SNRPCP09234 159 aaKnown RBP20.03■□□□□ 0.8
U2AF1-208ENST00000471250 C10orf99Q6UWK7 81 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 SMR3AQ99954 134 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 DERL1Q9BUN8 251 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 ZNF586Q9NXT0 402 aa20.03■□□□□ 0.8
U2AF1-208ENST00000471250 CRYBB3P26998 211 aa20.02■□□□□ 0.8
U2AF1-208ENST00000471250 OR4F17Q8NGA8 305 aa20.02■□□□□ 0.8
U2AF1-208ENST00000471250 TRBV12-3P01733 135 aa20.01■□□□□ 0.79
U2AF1-208ENST00000471250 IGLC2P0DOY2 106 aa20.01■□□□□ 0.79
U2AF1-208ENST00000471250 AKR1C3P42330 323 aa20.01■□□□□ 0.79
U2AF1-208ENST00000471250 RANP62826 216 aaKnown RBP20.01■□□□□ 0.79
U2AF1-208ENST00000471250 FOXE3Q13461 319 aa20.01■□□□□ 0.79
U2AF1-208ENST00000471250 TEX38Q6PEX7 206 aa20.01■□□□□ 0.79
U2AF1-208ENST00000471250 IGHV3OR16-8A0A075B7F1 116 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 CLPSL1A2RUU4 121 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms