RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 SEM1Q6ZVN7 128 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 PTH2Q96A98 100 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 ZNF714Q96N38 554 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 VSIRQ9H7M9 311 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 RAXQ9Y2V3 346 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 A0A1W2PRD5 423 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 A0A1W2PRF3 423 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 A0A1W2PRM7 423 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 TAX1BP3O14907 124 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
HOXB3-205ENST00000470495 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
HOXB3-205ENST00000470495 TBR1Q16650 682 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 C11orf53Q8IXP5 236 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 NPFFR1Q9GZQ6 430 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 PRSS29PA6NIE9 313 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 CXorf1O96002 111 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 IGLV1-44P01699 117 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 CCL3L1P16619 93 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 BVES-AS1Q5T3Y7 98 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 C8orf86Q6ZUL3 223 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 MS4A6AQ9H2W1 248 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 PTPRQQ9UMZ3 2332 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 IFITM1P13164 125 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 TFF3Q07654 80 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 TCF24Q7RTU0 167 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 C17orf100A8MU93 164 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 PRR7Q8TB68 274 aa13.58□□□□□ -0.24
HOXB3-205ENST00000470495 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.24
HOXB3-205ENST00000470495 PSMB11A5LHX3 300 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 MFAP2P55001 183 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 SPRNQ5BIV9 151 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 CYP2G1PQ6ZSU1 146 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 V9GYY9 64 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 TM4SF5O14894 197 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 IGLL1P15814 213 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 DUTP33316 252 aaKnown RBP13.57□□□□□ -0.24
HOXB3-205ENST00000470495 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 ARL16Q0P5N6 197 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 ACTL10Q5JWF8 245 aa13.57□□□□□ -0.24
HOXB3-205ENST00000470495 SSBP2P81877 361 aaPredicted RBP13.56□□□□□ -0.24
HOXB3-205ENST00000470495 CLDND2Q8NHS1 167 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 YLPM1P49750 1951 aaKnown RBP13.56□□□□□ -0.24
HOXB3-205ENST00000470495 NPIPB11E5RHQ5 1161 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 TMEM262E9PQX1 116 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 KLRB1Q12918 225 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 CTXND1A0A1B0GTU2 59 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 C9orf118A6NHY6 69 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 GPX1P07203 203 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 DEFA4P12838 97 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 GATA3P23771 443 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 PAX9P55771 341 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 PRSS8Q16651 343 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 DEFB125Q8N687 156 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 EDA2RQ9HAV5 297 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 SAA2-SAA4A0A096LPE2 208 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 NUPR1O60356 82 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 CGAP01215 116 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 SAA2P0DJI9 122 aaPredicted RBP13.56□□□□□ -0.24
HOXB3-205ENST00000470495 PAX1P15863 534 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 LMO1P25800 156 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 PSG5Q15238 335 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 TNXAQ16473 311 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 GNB4Q9HAV0 340 aa13.56□□□□□ -0.24
HOXB3-205ENST00000470495 TRAV25A0A0B4J276 109 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.55□□□□□ -0.24
HOXB3-205ENST00000470495 MIC13Q5XKP0 118 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 FLYWCH2Q96CP2 140 aaKnown RBP13.55□□□□□ -0.24
HOXB3-205ENST00000470495 CLEC7AQ9BXN2 247 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 ATRXP46100 2492 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 LYNX1G3V0Z9 82 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 FOXH1O75593 365 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 LYNX1P0DP58 116 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 TMEM242Q9NWH2 141 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 ABCA1O95477 2261 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 YPEL1O60688 119 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 NBL1P41271 181 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 YPEL2Q96QA6 119 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
HOXB3-205ENST00000470495 OPRK1P41145 380 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 DAZAP2Q15038 168 aaPredicted RBP13.54□□□□□ -0.24
HOXB3-205ENST00000470495 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
HOXB3-205ENST00000470495 H7C2G1 150 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 RNF115Q9Y4L5 304 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 FOXA3P55318 350 aaPredicted RBP13.54□□□□□ -0.24
HOXB3-205ENST00000470495 MSMPQ1L6U9 139 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 NEUROG1Q92886 237 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 PPDPFQ9H3Y8 114 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 PRNDQ9UKY0 176 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
HOXB3-205ENST00000470495 ACSM6Q6P461 480 aa13.53□□□□□ -0.24
HOXB3-205ENST00000470495 HIST1H4GQ99525 98 aa13.53□□□□□ -0.24
HOXB3-205ENST00000470495 GGTLC1Q9BX51 225 aa13.53□□□□□ -0.24
HOXB3-205ENST00000470495 ZNRD1Q9P1U0 126 aa13.53□□□□□ -0.24
HOXB3-205ENST00000470495 H3BTX0 84 aa13.53□□□□□ -0.24
HOXB3-205ENST00000470495 SUB1P53999 127 aaKnown RBP eCLIP13.53□□□□□ -0.24
HOXB3-205ENST00000470495 VMA21Q3ZAQ7 101 aa13.53□□□□□ -0.24
HOXB3-205ENST00000470495 RAX2Q96IS3 184 aa13.53□□□□□ -0.24
HOXB3-205ENST00000470495 TRAV3A0A0B4J244 114 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms