RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 CHEK1O14757 476 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 FCN3O75636 299 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 APELAP0DMC3 54 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 CD40P25942 277 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 FAM27E3Q08E93 113 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 CT83Q5H943 113 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 ERASQ7Z444 233 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 OR4C5Q8NGB2 326 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 TMEM186Q96B77 213 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 RITA1Q96K30 269 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
SFXN3-205ENST00000470252 IGHV2-70DA0A0C4DH43 119 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 TCRAP04437 139 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 VAMP3Q15836 100 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 C1RLQ9NZP8 487 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 ENSAO43768 121 aaKnown RBP10.54□□□□□ -0.72
SFXN3-205ENST00000470252 GP9P14770 177 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 TRGV9Q99603 122 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 TMEM191AQ9H0A3 160 aa10.54□□□□□ -0.72
SFXN3-205ENST00000470252 LOC102724200A0A096LPH7 203 aaPredicted RBP10.53□□□□□ -0.72
SFXN3-205ENST00000470252 IGHV3-72A0A0B4J1Y9 119 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 H0Y8G0 127 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 ZNF138P52744 262 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 CFAP47Q6ZTR5 3102 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 NUDT3O95989 172 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 CRYGCP07315 174 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 LRRC10Q5BKY1 277 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 FAM71F2Q6NXP2 309 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 SLC25A34Q6PIV7 304 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
SFXN3-205ENST00000470252 ZNF292O60281 2723 aa10.53□□□□□ -0.72
SFXN3-205ENST00000470252 TRAV8-1A0A0A6YYK1 113 aa10.52□□□□□ -0.72
SFXN3-205ENST00000470252 LIPFP07098 398 aa10.52□□□□□ -0.72
SFXN3-205ENST00000470252 COL8A1P27658 744 aa10.52□□□□□ -0.72
SFXN3-205ENST00000470252 MRGPRG-AS1Q2M3A8 158 aa10.52□□□□□ -0.72
SFXN3-205ENST00000470252 C1orf185Q5T7R7 199 aa10.52□□□□□ -0.72
SFXN3-205ENST00000470252 CIARTQ8N365 385 aaPredicted RBP10.52□□□□□ -0.72
SFXN3-205ENST00000470252 MAP1LC3CQ9BXW4 147 aa10.52□□□□□ -0.72
SFXN3-205ENST00000470252 TIMM8BQ9Y5J9 83 aaPredicted RBP10.52□□□□□ -0.72
SFXN3-205ENST00000470252 TOX4O94842 621 aa10.52□□□□□ -0.73
SFXN3-205ENST00000470252 Q86TA4 180 aa10.52□□□□□ -0.73
SFXN3-205ENST00000470252 ZADH2Q8N4Q0 377 aa10.52□□□□□ -0.73
SFXN3-205ENST00000470252 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
SFXN3-205ENST00000470252 BOD1L1Q8NFC6 3051 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 CSN3P07498 182 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 LYPD2Q6UXB3 125 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 C8orf46Q8TAG6 207 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 ROS1P08922 2347 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 PPIAL4EA0A075B759 164 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 TRAV30A0A087WSZ9 112 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.51□□□□□ -0.73
SFXN3-205ENST00000470252 C17orf100A8MU93 164 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 PPIAL4DF5H284 164 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 NDUFB3O43676 98 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 PPIAL4FP0DN26 164 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 BVES-AS1Q5T3Y7 98 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 PRNTQ86SH4 94 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 LINC00311Q8N616 119 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 TMEM116Q8NCL8 245 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 TMUB1Q9BVT8 246 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 GVINP1Q7Z2Y8 2422 aa10.51□□□□□ -0.73
SFXN3-205ENST00000470252 ABCA1O95477 2261 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 OR5AL1P0C617 328 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 MC5RP33032 325 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 RPL27AP46776 148 aaKnown RBP10.5□□□□□ -0.73
SFXN3-205ENST00000470252 LYZP61626 148 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 Q71RC1 249 aaPredicted RBP10.5□□□□□ -0.73
SFXN3-205ENST00000470252 NUP37Q8NFH4 326 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 CCL17Q92583 94 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 SCRT2Q9NQ03 307 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 HIGD1AQ9Y241 93 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 PIEZO1Q92508 2521 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 MALRD1Q5VYJ5 2156 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 FAM231BA6NCW3 169 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 HTR1DP28221 377 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 LGALS7P47929 136 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 PET117Q6UWS5 81 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 PMCHL2Q9BQD1 86 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 OTORQ9NRC9 128 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 RP1L1Q8IWN7 2480 aaPredicted RBP10.5□□□□□ -0.73
SFXN3-205ENST00000470252 DCHS1Q96JQ0 3298 aa10.5□□□□□ -0.73
SFXN3-205ENST00000470252 HAX1O00165 279 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 CNTFRP26992 372 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 CSTL1Q9H114 145 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 HSPB8Q9UJY1 196 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 CBY3A6NI87 242 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 TMEM238C9JI98 176 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 TMEM178BH3BS89 294 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 NDUFS8O00217 210 aa10.49□□□□□ -0.73
SFXN3-205ENST00000470252 APOHP02749 345 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms