RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 OR4E1P0C645 316 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 NPY1RP25929 384 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 GPR183P32249 361 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 PAFAH1B2P68402 229 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 TMEM187Q14656 261 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 SLC16A13Q7RTY0 426 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 LYG2Q86SG7 212 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 OR10W1Q8NGF6 305 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 OR2K2Q8NGT1 345 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 RNASEH2CQ8TDP1 164 aaKnown RBP4.73□□□□□ -1.65
PTCD3-208ENST00000469585 DLX4Q92988 240 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-208ENST00000469585 TMEM230Q96A57 120 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 RBMXL1Q96E39 390 aaKnown RBP4.73□□□□□ -1.65
PTCD3-208ENST00000469585 LITAFQ99732 161 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 C20orf24Q9BUV8 137 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 ALX4Q9H161 411 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-208ENST00000469585 TUBA4BQ9H853 241 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 GSN-AS1Q9NRJ2 163 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 NUDT15Q9NV35 164 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 TECRQ9NZ01 308 aaKnown RBP4.73□□□□□ -1.65
PTCD3-208ENST00000469585 ZNF256Q9Y2P7 627 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-208ENST00000469585 CUBNO60494 3623 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 IGLV11-55A0A075B6I3 123 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 TRAV6A0A075B6T7 132 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 C9orf170A2RU37 121 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 LGALS9O00182 355 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 NDUFA4O00483 81 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 TGOLN2O43493 480 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 PRAF2O60831 178 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 IGKV1-5P01602 117 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 IGHV3-23P01764 117 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 RLN2P04090 185 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 PET100P0DJ07 73 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 NKX2-1P43699 371 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-208ENST00000469585 TNFRSF9Q07011 255 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 DHRS2Q13268 280 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 PPP1R1AQ13522 171 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 SPINK9Q5DT21 86 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 GSG1LQ6UXU4 331 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 GPHB5Q86YW7 130 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 PPP1R14BQ96C90 147 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 GPR146Q96CH1 333 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 DAZ1Q9NQZ3 744 aaKnown RBP4.72□□□□□ -1.65
PTCD3-208ENST00000469585 GSKIPQ9P0R6 139 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 RNF24Q9Y225 148 aa4.72□□□□□ -1.65
PTCD3-208ENST00000469585 STRAPQ9Y3F4 350 aaKnown RBP4.72□□□□□ -1.65
PTCD3-208ENST00000469585 ZFP92A6NM28 416 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 PPP5D1E7EU14 171 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 INS-IGF2F8WCM5 200 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 SYNGR2O43760 224 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 SSNA1O43805 119 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 MT-CO2P00403 227 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 IGKV1-39P01597 117 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 APOHP02749 345 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 IGKV1D-39P04432 117 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 GP9P14770 177 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 MT3P25713 68 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 BCAP31P51572 246 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 CMC4P56277 68 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 CYCSP99999 105 aaKnown RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 DEFA5Q01523 94 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 AKR1C1Q04828 323 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 WT1-ASQ06250 92 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 ASAH1Q13510 395 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 RAB31Q13636 194 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 KLF5Q13887 457 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 GUCA2BQ16661 112 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 IAH1Q2TAA2 248 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 C2orf83Q53S99 150 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 FFAR4Q5NUL3 377 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 LYZL2Q7Z4W2 148 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 C12orf45Q8N5I9 185 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 LRTM2Q8N967 370 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 ZNF502Q8TBZ5 544 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 ZNF431Q8TF32 576 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 Q8WTZ3 238 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 METTL26Q96S19 204 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 RAB40CQ96S21 281 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 MRPL27Q9P0M9 148 aaKnown RBP4.71□□□□□ -1.66
PTCD3-208ENST00000469585 SMAD5-AS1Q9Y6J3 95 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 S4R3C0 116 aa4.71□□□□□ -1.66
PTCD3-208ENST00000469585 WNK1Q9H4A3 2382 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 IGHV4-4A0A075B6R2 117 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 TRAV14DV4A0A0A6YYC5 116 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 IGHV3-21A0A0B4J1V1 117 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 SMCO3A2RU48 225 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 MFSD2BA6NFX1 497 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 DNASE2O00115 360 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-208ENST00000469585 CFDP00746 253 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-208ENST00000469585 NPPCP23582 126 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 OR10J1P30954 320 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 S100A10P60903 97 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 HBG1P69891 147 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 HBG2P69892 147 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 KIAA0141Q14154 515 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-208ENST00000469585 MRGPRG-AS1Q2M3A8 158 aa4.7□□□□□ -1.66
PTCD3-208ENST00000469585 LBHQ53QV2 105 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-208ENST00000469585 NMSQ5H8A3 153 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms