RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SMDT1Q9H4I9 107 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 ZFAND3Q9H8U3 227 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 PFDN2Q9UHV9 154 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 HIGD1AQ9Y241 93 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 RNF114Q9Y508 228 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 PUS1Q9Y606 427 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRAF4-208ENST00000469529 U3KQE9 123 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 STAB1Q9NY15 2570 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 RAB19A4D1S5 217 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 MAP1LC3B2A6NCE7 125 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 BMPR1BO00238 502 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 CXorf1O96002 111 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 IL4P05112 153 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 ORM2P19652 201 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
TRAF4-208ENST00000469529 PSMB3P49720 205 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 PPT1P50897 306 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 FOXL1Q12952 345 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 FAM122CQ6P4D5 195 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 LCNL1Q6ZST4 164 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 SSX7Q7RTT5 188 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 LINC00305Q7Z4B0 112 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 C4orf3Q8WVX3 66 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 MAP1LC3BQ9GZQ8 125 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 HRH4Q9H3N8 390 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 GNB4Q9HAV0 340 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
TRAF4-208ENST00000469529 LGALS9O00182 355 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 CRYBB3P26998 211 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 FAM106AQ4KMX7 169 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 C1orf194Q5T5A4 169 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 OR1B1Q8NGR6 318 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 TMEM190Q8WZ59 177 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 SCRT1Q9BWW7 348 aa9.79□□□□□ -0.84
TRAF4-208ENST00000469529 SLC25A39Q9BZJ4 359 aaPredicted RBP9.79□□□□□ -0.84
TRAF4-208ENST00000469529 PPP5D1E7EU14 171 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 H3BRN7 92 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 ZP3P21754 424 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 LYZP61626 148 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 CCL20P78556 96 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 USF2Q15853 346 aaPredicted RBP9.78□□□□□ -0.84
TRAF4-208ENST00000469529 KHDC3LQ587J8 217 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 MIR17HGQ75NE6 70 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.78□□□□□ -0.84
TRAF4-208ENST00000469529 PCNPQ8WW12 178 aaKnown RBP9.78□□□□□ -0.84
TRAF4-208ENST00000469529 TMEM167BQ9NRX6 74 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 RABAC1Q9UI14 185 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 TSSC4Q9Y5U2 329 aaPredicted RBP9.78□□□□□ -0.84
TRAF4-208ENST00000469529 ARL2-SNX15V9GYD0 113 aa9.78□□□□□ -0.84
TRAF4-208ENST00000469529 ANKRD34BA5PLL1 514 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 ZNF98A6NK75 572 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 BUB3O43684 328 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 NPPCP23582 126 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 KLF5Q13887 457 aaPredicted RBP9.77□□□□□ -0.85
TRAF4-208ENST00000469529 SPATA31B1PQ5VZV4 182 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 UQCC3Q6UW78 93 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 REC114Q7Z4M0 266 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 ZNF503Q96F45 646 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 TXNDC17Q9BRA2 123 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 SLC25A2Q9BXI2 301 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 SLC25A22Q9H936 323 aa9.77□□□□□ -0.85
TRAF4-208ENST00000469529 CD5P06127 495 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 CD28P10747 220 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 GCHFRP30047 84 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 MORN5Q5VZ52 161 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 GPR82Q96P67 336 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 METTL26Q96S19 204 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 PBDC1Q9BVG4 233 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 OR51M1Q9H341 326 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 DOK5Q9P104 306 aa9.76□□□□□ -0.85
TRAF4-208ENST00000469529 TRAV5A0A0B4J249 113 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 A0A1W2PS18 150 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 A8MWP6 167 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 LINC01619G3V211 115 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 MRPS12O15235 138 aaKnown RBP9.75□□□□□ -0.85
TRAF4-208ENST00000469529 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
TRAF4-208ENST00000469529 RPL7P18124 248 aaKnown RBP9.75□□□□□ -0.85
TRAF4-208ENST00000469529 FHL3Q13643 280 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 RPEL1Q2QD12 228 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 BPIFA4PQ86YQ2 179 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 OR1N2Q8NGR9 330 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 UHRF2Q96PU4 802 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 CITED2Q99967 270 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-208ENST00000469529 NKX6-2Q9C056 277 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-208ENST00000469529 MANBALQ9NQG1 85 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 DAZ1Q9NQZ3 744 aaKnown RBP9.75□□□□□ -0.85
TRAF4-208ENST00000469529 UFC1Q9Y3C8 167 aa9.75□□□□□ -0.85
TRAF4-208ENST00000469529 IGHV4OR15-8A0A075B7B6 117 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 A0A087WW49 117 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 RBFOX3A6NFN3 312 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 HAX1O00165 279 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 IFNA1P01562 189 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 ARL14EPLP0DKL9 152 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 GP9P14770 177 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms