RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CTXND1A0A1B0GTU2 59 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 KBTBD11O94819 623 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 HRASP01112 189 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 IFNA10P01566 189 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 SLURP1P55000 103 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 FGF8P55075 233 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-203ENST00000468565 FFAR4Q5NUL3 377 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-203ENST00000468565 HEYLQ9NQ87 328 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-203ENST00000468565 MAS1LP35410 378 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 TAGLN2P37802 199 aaKnown RBP11.13□□□□□ -0.63
COL27A1-203ENST00000468565 ACSM6Q6P461 480 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 OR10G9Q8NGN4 311 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 OR10G7Q8NGN6 311 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 TMEM167AQ8TBQ9 72 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-203ENST00000468565 NPCDR1Q9BY65 106 aa11.13□□□□□ -0.63
COL27A1-203ENST00000468565 A0A087WWC5 75 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 C5orf52A6NGY3 159 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 CLN5O75503 358 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 OR2C1O95371 312 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 RAB11AP62491 216 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 DNLZQ5SXM8 178 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
COL27A1-203ENST00000468565 USMG5Q96IX5 58 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 GGACTQ9BVM4 153 aa11.12□□□□□ -0.63
COL27A1-203ENST00000468565 C15orf61A6NNL5 157 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 MPDU1O75352 247 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 NDUFS6O75380 124 aaKnown RBP11.11□□□□□ -0.63
COL27A1-203ENST00000468565 CD81P60033 236 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 ACOT6Q3I5F7 207 aaPredicted RBP11.11□□□□□ -0.63
COL27A1-203ENST00000468565 DEFB121Q5J5C9 76 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 LINC00528Q8N1L1 170 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 ISOC2Q96AB3 205 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 BET1LQ9NYM9 111 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 B4DEV8 164 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 CYB5BO43169 146 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 APELAP0DMC3 54 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 RAB5AP20339 215 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 DLK1P80370 383 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 POU2AF1Q16633 256 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 C10orf55Q5SWW7 151 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 SLC25A22Q9H936 323 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 ENY2Q9NPA8 101 aa11.11□□□□□ -0.63
COL27A1-203ENST00000468565 PSMB3P49720 205 aa11.1□□□□□ -0.63
COL27A1-203ENST00000468565 PNRC1Q12796 327 aaPredicted RBP11.1□□□□□ -0.63
COL27A1-203ENST00000468565 FAM90A2PQ658T7 463 aa11.1□□□□□ -0.63
COL27A1-203ENST00000468565 OR4A47Q6IF82 309 aa11.1□□□□□ -0.63
COL27A1-203ENST00000468565 ZNF343Q6P1L6 599 aa11.1□□□□□ -0.63
COL27A1-203ENST00000468565 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
COL27A1-203ENST00000468565 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
COL27A1-203ENST00000468565 TRAV3A0A0B4J244 114 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
COL27A1-203ENST00000468565 HSPE1P61604 102 aaKnown RBP11.09□□□□□ -0.63
COL27A1-203ENST00000468565 RPL8P62917 257 aaKnown RBP11.09□□□□□ -0.63
COL27A1-203ENST00000468565 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 ZFP82Q8N141 532 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 FAM24BQ8N5W8 94 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 PFDN5Q99471 154 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 PRNDQ9UKY0 176 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 ZNF256Q9Y2P7 627 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-203ENST00000468565 ZNF257Q9Y2Q1 563 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 CBY1Q9Y3M2 126 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 TRBV9A0A0B4J1U6 114 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 SMCO3A2RU48 225 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 TEX22C9J3V5 150 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 SAP30O75446 220 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 TMEM14BQ9NUH8 114 aa11.09□□□□□ -0.63
COL27A1-203ENST00000468565 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
COL27A1-203ENST00000468565 CXorf65A6NEN9 183 aa11.08□□□□□ -0.64
COL27A1-203ENST00000468565 NPIPB5A8MRT5 1133 aa11.08□□□□□ -0.64
COL27A1-203ENST00000468565 RHOGP84095 191 aa11.08□□□□□ -0.64
COL27A1-203ENST00000468565 C2CD4CQ8TF44 421 aa11.08□□□□□ -0.64
COL27A1-203ENST00000468565 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
COL27A1-203ENST00000468565 PRR25Q96S07 402 aa11.08□□□□□ -0.64
COL27A1-203ENST00000468565 IL6RP08887 468 aaPredicted RBP11.07□□□□□ -0.64
COL27A1-203ENST00000468565 RAB4AP20338 218 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 OPRK1P41145 380 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 CDC34P49427 236 aaPredicted RBP11.07□□□□□ -0.64
COL27A1-203ENST00000468565 TAS2R60P59551 318 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 SNRPEP62304 92 aaKnown RBP11.07□□□□□ -0.64
COL27A1-203ENST00000468565 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
COL27A1-203ENST00000468565 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 ELOVL1Q9BW60 279 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
COL27A1-203ENST00000468565 OR51B2Q9Y5P1 312 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 ZNF727A8MUV8 499 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 E7EUB6 86 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 NPY1RP25929 384 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 NECAP1Q8NC96 275 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms