RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 NUDT15Q9NV35 164 aa8.22□□□□□ -1.09
COL4A6-205ENST00000468338 TP53TG1Q9Y2A0 90 aa8.22□□□□□ -1.09
COL4A6-205ENST00000468338 TRAV6A0A075B6T7 132 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 APOC4P55056 127 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 ZNF90Q03938 601 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 ZNF124Q15973 351 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 SPANXN5Q5MJ07 72 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 CASC10Q5T4H9 136 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 OR8G2PQ6IF36 304 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 TMEM14EPQ6UXP3 125 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 APRG1Q8IVJ8 170 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 CCDC28AQ8IWP9 274 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 FAM24BQ8N5W8 94 aa8.21□□□□□ -1.1
COL4A6-205ENST00000468338 ZNF431Q8TF32 576 aaPredicted RBP8.21□□□□□ -1.1
COL4A6-205ENST00000468338 NARS2Q96I59 477 aaKnown RBP8.21□□□□□ -1.1
COL4A6-205ENST00000468338 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
COL4A6-205ENST00000468338 CSMD3Q7Z407 3707 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 FAM240BA0A1B0GVZ2 78 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 HELTA6NFD8 242 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 ZFP92A6NM28 416 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 SNRPGP15A8MWD9 76 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 H3BP45 60 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 DNASE2O00115 360 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-205ENST00000468338 UPK1BO75841 260 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 AP2S1P53680 142 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-205ENST00000468338 TAS2R30P59541 319 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 IFITM3Q01628 133 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 ZNF846Q147U1 533 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 IAH1Q2TAA2 248 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-205ENST00000468338 ZBTB8BQ8NAP8 495 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-205ENST00000468338 RAB40CQ96S21 281 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 SEPSECSQ9HD40 501 aaKnown RBP8.2□□□□□ -1.1
COL4A6-205ENST00000468338 RABAC1Q9UI14 185 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 RCL1Q9Y2P8 373 aaKnown RBP8.2□□□□□ -1.1
COL4A6-205ENST00000468338 STARD9Q9P2P6 4700 aa8.2□□□□□ -1.1
COL4A6-205ENST00000468338 TSC22D2O75157 780 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 CFDP00746 253 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-205ENST00000468338 IL5P05113 134 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 FABP1P07148 127 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 EIF2B2P49770 351 aaKnown RBP8.19□□□□□ -1.1
COL4A6-205ENST00000468338 DEFB131AP59861 70 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 IL15RAQ13261 267 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 MZT2BQ6NZ67 158 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 TMEM144Q7Z5S9 345 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 RNF183Q96D59 192 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 SEC22CQ9BRL7 303 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 BATF3Q9NR55 127 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
COL4A6-205ENST00000468338 C7orf66A4D0T2 115 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 FNDC10F2Z333 226 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 SPRY2O43597 315 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 SSSCA1O60232 199 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 MBPP02686 304 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-205ENST00000468338 LYL1P12980 280 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 RPL35AP18077 110 aaKnown RBP8.18□□□□□ -1.1
COL4A6-205ENST00000468338 NUP62P37198 522 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-205ENST00000468338 C1orf194Q5T5A4 169 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 TMEM182Q6ZP80 229 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-205ENST00000468338 ACOT7LQ6ZUV0 252 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 C12orf45Q8N5I9 185 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-205ENST00000468338 STXBP6Q8NFX7 210 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 CSTL1Q9H114 145 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 C11orf1Q9H5F2 150 aa8.18□□□□□ -1.1
COL4A6-205ENST00000468338 PAIP2BQ9ULR5 123 aaKnown RBP8.18□□□□□ -1.1
COL4A6-205ENST00000468338 DYNC2H1Q8NCM8 4307 aaKnown RBP8.18□□□□□ -1.1
COL4A6-205ENST00000468338 CCSO14618 274 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 CCNKO75909 580 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 DLK1P80370 383 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 OR2F1Q13607 317 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 DEFB135Q30KP9 77 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 LEMD1Q68G75 181 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 SIGLEC15Q6ZMC9 328 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 C2orf50Q96LR7 162 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 NRN1Q9NPD7 142 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 GSKIPQ9P0R6 139 aa8.17□□□□□ -1.1
COL4A6-205ENST00000468338 K7EPK0 472 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 GIG44P09565 113 aaPredicted RBP8.16□□□□□ -1.1
COL4A6-205ENST00000468338 METTL15P1P0C7V9 234 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 ZNF688P0C7X2 276 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 GCSHP23434 173 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 PLP1P60201 277 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 LYZP61626 148 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 ARL16Q0P5N6 197 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 TRPT1Q86TN4 253 aaKnown RBP8.16□□□□□ -1.1
COL4A6-205ENST00000468338 PBDC1Q9BVG4 233 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 GGACTQ9BVM4 153 aa8.16□□□□□ -1.1
COL4A6-205ENST00000468338 RYR3Q15413 4870 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 SOCS3O14543 225 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 DEDDO75618 318 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 GATA2P23769 480 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-205ENST00000468338 AKR1C1Q04828 323 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 NRARPQ7Z6K4 114 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 BPIFCQ8NFQ6 507 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 OR10P1Q8NGE3 313 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 IL17DQ8TAD2 202 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 GATAD1Q8WUU5 269 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 C17orf77Q96MU5 243 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 SLC25A32Q9H2D1 315 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 NPVFQ9HCQ7 196 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms