RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DAD1P61803 113 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 GAGE2EQ4V326 116 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 Q5BKY6 102 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 TSKUQ8WUA8 353 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 GAGE2DQ9UEU5 116 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 KLF12Q9Y4X4 402 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 TRAV5A0A0B4J249 113 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 PMS2P5A8MQ11 134 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 A8MWV9 139 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 NDUFS8O00217 210 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 TNFSF13O75888 250 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 FOXL1Q12952 345 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 SCRT1Q9BWW7 348 aa7.15□□□□□ -1.27
HPS4-209ENST00000466781 CCDC88CQ9P219 2028 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 A0A1B0GWJ7 208 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 SLC25A48Q6ZT89 311 aaKnown RBP7.14□□□□□ -1.27
HPS4-209ENST00000466781 ORAOV1Q8WV07 137 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 IFI27L1Q96BM0 104 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 Q96MF0 132 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 FNDC4Q9H6D8 234 aaPredicted RBP7.14□□□□□ -1.27
HPS4-209ENST00000466781 BUB1B-PAK6H3BSN5 160 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 ZNF561-AS1K7EIQ3 104 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 LHBP01229 141 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 TMEM249Q2WGJ8 235 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 LINC01559Q495D7 138 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 ZNF329Q86UD4 541 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 RPUSD1Q9UJJ7 312 aaKnown RBP7.14□□□□□ -1.27
HPS4-209ENST00000466781 F5H768 121 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 LINC01619G3V211 115 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 HEPN1Q6WQI6 88 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 GTF3AQ92664 365 aaKnown RBP7.14□□□□□ -1.27
HPS4-209ENST00000466781 CARHSP1Q9Y2V2 147 aaKnown RBP7.14□□□□□ -1.27
HPS4-209ENST00000466781 GBF1Q92538 1859 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 VCYO14598 125 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 CGB7P0DN87 165 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 SRSF4Q08170 494 aaKnown RBP7.14□□□□□ -1.27
HPS4-209ENST00000466781 DEFB104AQ8WTQ1 72 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 DLX4Q92988 240 aaPredicted RBP7.14□□□□□ -1.27
HPS4-209ENST00000466781 TRGV9Q99603 122 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 GNB1LQ9BYB4 327 aa7.14□□□□□ -1.27
HPS4-209ENST00000466781 SH2D1AO60880 128 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 C5orf64Q2M2E5 130 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 TMEM155Q4W5P6 130 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 TMEM170AQ8WVE7 144 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 PSPNO60542 156 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 APOC4P55056 127 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 LY6G6EA0A0G2JKS1 128 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 GATA3P23771 443 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 MCRIP2Q9BUT9 160 aaKnown RBP7.13□□□□□ -1.27
HPS4-209ENST00000466781 BPESC1Q9GZL8 116 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 U3KQA8 63 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 SRRM5B3KS81 715 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 MST1P26927 711 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 RASL11AQ6T310 242 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 NKAPP1Q8N9T2 125 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 FGFBP3Q8TAT2 258 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 RMI2Q96E14 147 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 ZMAT4Q9H898 229 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 TRAV9-2A0A087WT02 112 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 A0A087WV48 116 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 NCR2O95944 276 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 RBMY1FQ15415 496 aaKnown RBP7.13□□□□□ -1.27
HPS4-209ENST00000466781 FAM110DQ8TAY7 271 aaPredicted RBP7.13□□□□□ -1.27
HPS4-209ENST00000466781 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
HPS4-209ENST00000466781 AMBPP02760 352 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 PRR30Q53SZ7 412 aaPredicted RBP7.12□□□□□ -1.27
HPS4-209ENST00000466781 C10orf55Q5SWW7 151 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 GAFA1Q96PS6 74 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 ANAPC13Q9BS18 74 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 TRAV13-1A0A0B4J241 112 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 MYMXA0A1B0GTQ4 84 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 H0YJW9 148 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 SUPT4H1P63272 117 aaKnown RBP7.12□□□□□ -1.27
HPS4-209ENST00000466781 C1QL4Q86Z23 238 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 TMEM126AQ9H061 195 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 D6R8Y8 96 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 SYNJ2BPP57105 145 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 RHPN1-AS1Q9BWJ2 59 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 TCRAP04437 139 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 LYZL1Q6UWQ5 148 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 GGNQ86UU5 652 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 LURAP1LQ8IV03 231 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 ZNF48Q96MX3 618 aaPredicted RBP7.12□□□□□ -1.27
HPS4-209ENST00000466781 MSMBP08118 114 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 RUSC1-AS1Q66K80 236 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 CD177Q8N6Q3 437 aa7.12□□□□□ -1.27
HPS4-209ENST00000466781 CLPSP04118 112 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 HSD52Q0P140 79 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 PSG3Q16557 428 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 OCC1Q8TAD7 63 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 DAZ1Q9NQZ3 744 aaKnown RBP7.11□□□□□ -1.27
HPS4-209ENST00000466781 CKAP5Q14008 2032 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 DOCK4Q8N1I0 1966 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 SELLP14151 372 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 PLA2G5P39877 138 aa7.11□□□□□ -1.27
HPS4-209ENST00000466781 DMRTA1Q5VZB9 504 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms