RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 Q9H3A6 140 aa13.04□□□□□ -0.32
SLX4-202ENST00000466154 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
SLX4-202ENST00000466154 A6NNC1 897 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 BRS3P32247 399 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 NUP35Q8NFH5 326 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 ZNF596Q8TC21 504 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 NDUFAF3Q9BU61 184 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 CHODLQ9H9P2 273 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 F11RQ9Y624 299 aaKnown RBP13.03□□□□□ -0.32
SLX4-202ENST00000466154 IGHV3OR16-8A0A075B7F1 116 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 ATOH7Q8N100 152 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 DAZAP1Q96EP5 407 aaKnown RBP13.03□□□□□ -0.32
SLX4-202ENST00000466154 TRAV9-1A0A075B6T8 112 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 IGHV3-35A0A0C4DH35 117 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 LIPFP07098 398 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 Q71RC1 249 aaPredicted RBP13.03□□□□□ -0.32
SLX4-202ENST00000466154 PRNTQ86SH4 94 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 PGLYRP4Q96LB8 373 aa13.03□□□□□ -0.32
SLX4-202ENST00000466154 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.32
SLX4-202ENST00000466154 PAFAH1B2P68402 229 aa13.02□□□□□ -0.32
SLX4-202ENST00000466154 DNLZQ5SXM8 178 aa13.02□□□□□ -0.32
SLX4-202ENST00000466154 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.32
SLX4-202ENST00000466154 TPPP3Q9BW30 176 aa13.02□□□□□ -0.32
SLX4-202ENST00000466154 FBXL7Q9UJT9 491 aa13.02□□□□□ -0.32
SLX4-202ENST00000466154 SMIM27A0A1W2PRY6 76 aa13.02□□□□□ -0.33
SLX4-202ENST00000466154 TEX22C9J3V5 150 aa13.02□□□□□ -0.33
SLX4-202ENST00000466154 HTR1DP28221 377 aa13.02□□□□□ -0.33
SLX4-202ENST00000466154 FOXA3P55318 350 aaPredicted RBP13.02□□□□□ -0.33
SLX4-202ENST00000466154 LINC00322Q6ZN03 302 aaPredicted RBP13.02□□□□□ -0.33
SLX4-202ENST00000466154 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.33
SLX4-202ENST00000466154 C8orf31Q8N9H6 132 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 HLA-DQA1P01909 254 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 CA7P43166 264 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 RNASEKQ6P5S7 137 aaKnown RBP13.01□□□□□ -0.33
SLX4-202ENST00000466154 TIMD4Q96H15 378 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 TRGV9Q99603 122 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 VAMP8Q9BV40 100 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 RAB1BQ9H0U4 201 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 INS-IGF2F8WCM5 200 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 NDUFS7O75251 213 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 FSTL3O95633 263 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 MT-ND6P03923 174 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 HIST1H1EP10412 219 aaKnown RBP13.01□□□□□ -0.33
SLX4-202ENST00000466154 FBLN7Q53RD9 439 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 SSX8Q7RTT4 187 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 CIARTQ8N365 385 aaPredicted RBP13.01□□□□□ -0.33
SLX4-202ENST00000466154 TMEM116Q8NCL8 245 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 NRN1Q9NPD7 142 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 CBY1Q9Y3M2 126 aa13.01□□□□□ -0.33
SLX4-202ENST00000466154 M0QZ24 198 aa13□□□□□ -0.33
SLX4-202ENST00000466154 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
SLX4-202ENST00000466154 TRBV9A0A0B4J1U6 114 aa13□□□□□ -0.33
SLX4-202ENST00000466154 DIRC3C9JPN6 131 aa13□□□□□ -0.33
SLX4-202ENST00000466154 P01737 135 aa13□□□□□ -0.33
SLX4-202ENST00000466154 C8orf46Q8TAG6 207 aa13□□□□□ -0.33
SLX4-202ENST00000466154 A0A1W2PS18 150 aa13□□□□□ -0.33
SLX4-202ENST00000466154 IL4P05112 153 aa13□□□□□ -0.33
SLX4-202ENST00000466154 GDF5OSQ5U4N7 250 aa13□□□□□ -0.33
SLX4-202ENST00000466154 SLC25A39Q9BZJ4 359 aaPredicted RBP13□□□□□ -0.33
SLX4-202ENST00000466154 GPX1P07203 203 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 GRAMD2BQ96HH9 432 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 GPR82Q96P67 336 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 IGLC1P0CG04 106 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 FCGR2BP31994 310 aaPredicted RBP12.99□□□□□ -0.33
SLX4-202ENST00000466154 RELQ04864 619 aaPredicted RBP12.99□□□□□ -0.33
SLX4-202ENST00000466154 PMCHL1Q16048 86 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 TMEM183BQ1AE95 376 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 TNFRSF14Q92956 283 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 DPM3Q9P2X0 92 aa12.99□□□□□ -0.33
SLX4-202ENST00000466154 LOC105371242A0A075B767 164 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 HSBP1O75506 76 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 CRYGBP07316 175 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 C1orf194Q5T5A4 169 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 TPTE2P1Q5T6R2 138 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 HIVEP3Q5T1R4 2406 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 TCRAP04437 139 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 CRYGCP07315 174 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 GP9P14770 177 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 COL8A1P27658 744 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 ADORA2A-AS1P86434 159 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 Q0VG73 95 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
SLX4-202ENST00000466154 C5orf17Q8NAS9 161 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 BEND2Q8NDZ0 799 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 LY6DQ14210 128 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 BORCS7Q96B45 105 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 LPAR2Q9HBW0 351 aa12.98□□□□□ -0.33
SLX4-202ENST00000466154 LCN12Q6JVE5 192 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 SNHG12Q9BXW3 62 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 SPG11Q96JI7 2443 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 NBR2O15453 112 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 GNG7O60262 68 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 NPSP0C0P6 89 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 Q56UQ5 140 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 CELSR1Q9NYQ6 3014 aa12.97□□□□□ -0.33
SLX4-202ENST00000466154 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
SLX4-202ENST00000466154 TSKUQ8WUA8 353 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms