RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NPBWR1P48145 328 aa10.77□□□□□ -0.69
HDAC6-215ENST00000465457 BTN1A1Q13410 526 aa10.77□□□□□ -0.69
HDAC6-215ENST00000465457 MLANAQ16655 118 aa10.77□□□□□ -0.69
HDAC6-215ENST00000465457 KLK9Q2XQG4 91 aa10.77□□□□□ -0.69
HDAC6-215ENST00000465457 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.69
HDAC6-215ENST00000465457 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-215ENST00000465457 KLK9Q9UKQ9 250 aa10.77□□□□□ -0.69
HDAC6-215ENST00000465457 HYDINQ4G0P3 5121 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 IGLV11-55A0A075B6I3 123 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 C11orf94C9JXX5 98 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 M0R036 132 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 HMGB3O15347 200 aaKnown RBP10.76□□□□□ -0.69
HDAC6-215ENST00000465457 C8orf88P0DMB2 117 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 PLP1P60201 277 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 C10orf113Q5VZT2 155 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 ATRAIDQ6UW56 229 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 LYSTQ99698 3801 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 B9D2Q9BPU9 175 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 SEPSECSQ9HD40 501 aaKnown RBP10.76□□□□□ -0.69
HDAC6-215ENST00000465457 PRELID1Q9Y255 219 aa10.76□□□□□ -0.69
HDAC6-215ENST00000465457 PSMB11A5LHX3 300 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 H3BQ15 152 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 K7EIM0 57 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 PAGE4O60829 102 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 APELAP0DMC3 54 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 HOXD3P31249 432 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-215ENST00000465457 CRIP2P52943 208 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-215ENST00000465457 CD81P60033 236 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 FAM90A2PQ658T7 463 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 C5orf56Q8N8D9 126 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 OR5R1Q8NH85 324 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 TVP23CQ96ET8 276 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 TXN2Q99757 166 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 TMPRSS5Q9H3S3 457 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 SMCO4Q9NRQ5 59 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 DMRT1Q9Y5R6 373 aa10.75□□□□□ -0.69
HDAC6-215ENST00000465457 A0A1W2PRX2 142 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 DNASE2O00115 360 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-215ENST00000465457 HYPMO75409 117 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 IGLC1P0CG04 106 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 CD33P20138 364 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 S100A7P31151 101 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 FCGR2BP31994 310 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-215ENST00000465457 CEBPGP53567 150 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 MFAP4P55083 255 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 NDPQ00604 133 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 AKIRIN2Q53H80 203 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 ASPHD1Q5U4P2 390 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 MIR17HGQ75NE6 70 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 OR4F17Q8NGA8 305 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 WIPF2Q8TF74 440 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-215ENST00000465457 UHRF2Q96PU4 802 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 OR4F4Q96R69 305 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 TCEAL7Q9BRU2 100 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 TUBA4BQ9H853 241 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 ZNF702PQ9H963 129 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 MRPL36Q9P0J6 103 aaKnown RBP10.74□□□□□ -0.69
HDAC6-215ENST00000465457 RNF24Q9Y225 148 aa10.74□□□□□ -0.69
HDAC6-215ENST00000465457 PUS1Q9Y606 427 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC6-215ENST00000465457 A0A087WWC5 75 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 ZNF727A8MUV8 499 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 OR7C2O60412 319 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 YPEL3P61236 119 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-215ENST00000465457 ZNF90Q03938 601 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 CST9LP1Q5W188 147 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 NDUFA11Q86Y39 141 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 TMEM37Q8WXS4 190 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 ATP6V0BQ99437 205 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 SSX3Q99909 188 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 SMIM7Q9BQ49 75 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 FAM103A1Q9BTL3 118 aaKnown RBP10.73□□□□□ -0.69
HDAC6-215ENST00000465457 NAT8Q9UHE5 227 aa10.73□□□□□ -0.69
HDAC6-215ENST00000465457 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 A6NDX4 124 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 GNG7O60262 68 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 TOMM40O96008 361 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 EGR2P11161 476 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-215ENST00000465457 GATA2P23769 480 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-215ENST00000465457 SPATA31B1PQ5VZV4 182 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 UNQ5815/PRO19632Q6UWF5 114 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 WFDC9Q8NEX5 89 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 FANCD2OSQ96PS1 177 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 RPS10P5Q9NQ39 176 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 C21orf62Q9NYP8 219 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 CSMD3Q7Z407 3707 aa10.72□□□□□ -0.69
HDAC6-215ENST00000465457 STARD9Q9P2P6 4700 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 A0A1W2PRE2 83 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 CXorf65A6NEN9 183 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 FAM74A7A6NL05 159 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 ATP6V0E1O15342 81 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 BRI3O95415 125 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 RD3LP0DJH9 198 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 UBE2L3P68036 154 aaKnown RBP10.71□□□□□ -0.69
HDAC6-215ENST00000465457 TMEM95Q3KNT9 176 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 C19orf35Q6ZS72 473 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 C15orf54Q8N8G6 183 aa10.71□□□□□ -0.69
HDAC6-215ENST00000465457 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms