RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 XCL1P47992 114 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 RHOGP84095 191 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 TMEM244Q5VVB8 128 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 PHF5AQ7RTV0 110 aaKnown RBP2.53□□□□□ -2
PTCD3-205ENST00000464541 CTAGE3PQ8IX95 158 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 SIGLECL1Q8N7X8 197 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 MUC7Q8TAX7 377 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 DCANP1Q8TF63 244 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 MCEEQ96PE7 176 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 CBLN4Q9NTU7 201 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 MRPL16Q9NX20 251 aaKnown RBP2.53□□□□□ -2
PTCD3-205ENST00000464541 BAIAP2Q9UQB8 552 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 HS3ST2Q9Y278 367 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 HECW1Q76N89 1606 aa2.53□□□□□ -2
PTCD3-205ENST00000464541 FAM135AQ9P2D6 1515 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 NCAPD3P42695 1498 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 FBN1P35555 2871 aaKnown RBP2.52□□□□□ -2.01
PTCD3-205ENST00000464541 RALGAPA2Q2PPJ7 1873 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 CCNB3Q8WWL7 1395 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 IBTKQ9P2D0 1353 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-205ENST00000464541 ODAMA1E959 279 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 NCR2O95944 276 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 HLA-EP13747 358 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 RPL22P35268 128 aaKnown RBP2.52□□□□□ -2.01
PTCD3-205ENST00000464541 GUCA1AP43080 201 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-205ENST00000464541 DEFB134Q4QY38 66 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 KHDC3LQ587J8 217 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 GLYATL3Q5SZD4 288 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-205ENST00000464541 AMMECR1LQ6DCA0 310 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 HAGHLQ6PII5 290 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-205ENST00000464541 DEFB128Q7Z7B8 93 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 OR10P1Q8NGE3 313 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 OR4C6Q8NH72 309 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 WFDC5Q8TCV5 224 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 TAF9BQ9HBM6 251 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 NHP2Q9NX24 153 aaKnown RBP2.52□□□□□ -2.01
PTCD3-205ENST00000464541 NLRC5Q86WI3 1866 aa2.52□□□□□ -2.01
PTCD3-205ENST00000464541 ATG2BQ96BY7 2078 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 RIMS1Q86UR5 1692 aaKnown RBP2.51□□□□□ -2.01
PTCD3-205ENST00000464541 MYH10P35580 1976 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 IGHV3-15A0A0B4J1V0 119 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 C19orf71A6NCJ1 209 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 MT-ND4LP03901 98 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 CXCL1P09341 107 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 METTL15P1P0C7V9 234 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 KDELR1P24390 212 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 ARPP19P56211 112 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 OR5A2Q8NGI9 324 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 BRK1Q8WUW1 75 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 IMMP2LQ96T52 175 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 PKMYT1Q99640 499 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 RNF11Q9Y3C5 154 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 NAIPQ13075 1403 aa2.51□□□□□ -2.01
PTCD3-205ENST00000464541 ATAD5Q96QE3 1844 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 IGKV1D-37A0A075B6S9 117 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 IGKV1-9A0A0C4DH69 117 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 TRBV27A0A0K0K1C4 114 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 OR2T8A6NH00 312 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 GGTLC3B5MD39 225 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 C3orf84H3BNL1 204 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 H3BT86 120 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 IGF2P01344 180 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 IGKV1-16P04430 117 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 RAB5CP51148 216 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 HES1Q14469 280 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 HSD17B12Q53GQ0 312 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 ZNF660Q6AZW8 331 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-205ENST00000464541 LYZL1Q6UWQ5 148 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 TMEM14EPQ6UXP3 125 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 C2orf91Q6ZV80 131 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 DYNAPQ8N1N2 210 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 OR4B1Q8NGF8 309 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 OR5H6Q8NGV6 325 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 ZNF443Q9Y2A4 671 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-205ENST00000464541 R4GN34 69 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 ARHGEF11O15085 1522 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 MRC2Q9UBG0 1479 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 ADGBQ8N7X0 1667 aa2.5□□□□□ -2.01
PTCD3-205ENST00000464541 KIAA1671Q9BY89 1806 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 TOPBP1Q92547 1522 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 TRGV5A0A0B4J1U4 118 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 C20orf202A1L168 122 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 A8MWV9 139 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 F6UZH7 168 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 SDCBPO00560 298 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-205ENST00000464541 MT-ND6P03923 174 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 S100A8P05109 93 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 COX6A1P12074 109 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 CCL5P13501 91 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 RNASE4P34096 147 aaKnown RBP2.49□□□□□ -2.01
PTCD3-205ENST00000464541 FXYD2P54710 66 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 PABPC1L2AQ5JQF8 200 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 Q5XG85 94 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 TEX29Q8N6K0 151 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 TCTEX1D1Q8N7M0 179 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 OR4E2Q8NGC2 313 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 PFN4Q8NHR9 129 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 CMTM2Q8TAZ6 248 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms