RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 NDUFB3O43676 98 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 CST8O60676 142 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 CD2P06729 351 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 CTXN2P0C2S0 81 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 LIN52Q52LA3 116 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 S100A7AQ86SG5 101 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 GKN2Q86XP6 184 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 OR10K1Q8NGX5 313 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 TMEM70Q9BUB7 260 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 PARVBQ9HBI1 364 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 TMEM14CQ9P0S9 112 aa0.6□□□□□ -2.31
PTPN12-210ENST00000464313 COL1A1P02452 1464 aaPredicted RBP0.6□□□□□ -2.31
PTPN12-210ENST00000464313 HEATR1Q9H583 2144 aaKnown RBP0.59□□□□□ -2.31
PTPN12-210ENST00000464313 PEAK1Q9H792 1746 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 TRBV19A0A075B6N1 114 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 TRGV10A0A0A0MS01 117 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 IGHV1-58A0A0C4DH39 117 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 TLCD2A6NGC4 264 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 TAX1BP3O14907 124 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 ROMO1P60602 79 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 C22orf39Q6P5X5 142 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 LINC00322Q6ZN03 302 aaPredicted RBP0.59□□□□□ -2.31
PTPN12-210ENST00000464313 SLC25A21Q9BQT8 299 aaPredicted RBP0.59□□□□□ -2.31
PTPN12-210ENST00000464313 C9orf16Q9BUW7 83 aa0.59□□□□□ -2.31
PTPN12-210ENST00000464313 KIF1BO60333 1816 aa0.59□□□□□ -2.32
PTPN12-210ENST00000464313 CNTRLQ7Z7A1 2325 aa0.58□□□□□ -2.32
PTPN12-210ENST00000464313 HMGB3O15347 200 aaKnown RBP0.58□□□□□ -2.32
PTPN12-210ENST00000464313 GOLT1AQ6ZVE7 132 aa0.58□□□□□ -2.32
PTPN12-210ENST00000464313 LINC00052Q96N35 136 aa0.58□□□□□ -2.32
PTPN12-210ENST00000464313 TP53RKQ96S44 253 aa0.58□□□□□ -2.32
PTPN12-210ENST00000464313 ORMDL1Q9P0S3 153 aa0.58□□□□□ -2.32
PTPN12-210ENST00000464313 PCTPQ9UKL6 214 aa0.58□□□□□ -2.32
PTPN12-210ENST00000464313 FMN1Q68DA7 1419 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 A8MWV9 139 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 M0R378 163 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 NUPR1O60356 82 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 CST2P09228 141 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 CYBAP13498 195 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 TAF1AQ15573 450 aaPredicted RBP0.57□□□□□ -2.32
PTPN12-210ENST00000464313 BCL2L15Q5TBC7 163 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 MNS1Q8NEH6 495 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 OR10X1Q8NGY0 326 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 YPEL2Q96QA6 119 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 IMUPQ9GZP8 106 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 PSTPIP2Q9H939 334 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 OPTCQ9UBM4 332 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 MED12Q93074 2177 aa0.57□□□□□ -2.32
PTPN12-210ENST00000464313 ZFC3H1O60293 1989 aaKnown RBP0.56□□□□□ -2.32
PTPN12-210ENST00000464313 TRAV10A0A0B4J240 114 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 OR2T8A6NH00 312 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 FADDQ13158 208 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 ZNF833PQ6ZTB9 187 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 OR5D14Q8NGL3 314 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 LINC00467Q9BRT7 94 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 ARL2BPQ9Y2Y0 163 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 LY96Q9Y6Y9 160 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 ALPK3Q96L96 1907 aa0.56□□□□□ -2.32
PTPN12-210ENST00000464313 PLXNA4Q9HCM2 1894 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 TMEM256-PLSCR3K7ERE1 68 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 SERPINA1P01009 418 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 IFNA7P01567 189 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 IFNA6P05013 189 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 HOXA6P31267 233 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 UBE2BP63146 152 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 REEP5Q00765 189 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 C1orf134Q5TEV5 83 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 C2orf82Q6UX34 121 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 C4orf22Q6V702 233 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 Q8TAT8 98 aa0.55□□□□□ -2.32
PTPN12-210ENST00000464313 ARHGEF11O15085 1522 aa0.54□□□□□ -2.32
PTPN12-210ENST00000464313 PCF11O94913 1555 aaKnown RBP0.54□□□□□ -2.32
PTPN12-210ENST00000464313 E7EUB6 86 aa0.54□□□□□ -2.32
PTPN12-210ENST00000464313 DSCR4P56555 118 aaPredicted RBP0.54□□□□□ -2.32
PTPN12-210ENST00000464313 PLPP5Q8NEB5 264 aa0.54□□□□□ -2.32
PTPN12-210ENST00000464313 GGACTQ9BVM4 153 aa0.54□□□□□ -2.32
PTPN12-210ENST00000464313 NPCDR1Q9BY65 106 aa0.54□□□□□ -2.32
PTPN12-210ENST00000464313 A0A1W2PPM0 123 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 S100A6P06703 90 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 DYNLT3P51808 116 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 HSPE1P61604 102 aaKnown RBP0.53□□□□□ -2.32
PTPN12-210ENST00000464313 AKIRIN2Q53H80 203 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 EIF5AL1Q6IS14 154 aaKnown RBP0.53□□□□□ -2.32
PTPN12-210ENST00000464313 KRTAP26-1Q6PEX3 210 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 EXOC3-AS1Q8N2X6 119 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 ARMC1Q9NVT9 282 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 TNFSF18Q9UNG2 199 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 CHD3Q12873 2000 aaKnown RBP0.53□□□□□ -2.32
PTPN12-210ENST00000464313 TNS3Q68CZ2 1445 aa0.53□□□□□ -2.32
PTPN12-210ENST00000464313 UNC13CQ8NB66 2214 aa0.53□□□□□ -2.33
PTPN12-210ENST00000464313 MYO5AQ9Y4I1 1855 aaKnown RBP0.52□□□□□ -2.33
PTPN12-210ENST00000464313 CITO14578 2027 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 F8W1H4 67 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 BANF1O75531 89 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 ERC2-IT1O76042 136 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 IGLV1-51P01701 117 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 C1QBP02746 253 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 HLA-EP13747 358 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 HSD11B1P28845 292 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 CDK6Q00534 326 aa0.52□□□□□ -2.33
PTPN12-210ENST00000464313 MYL5Q02045 173 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms