RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ERVFC1-1P60608 527 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 PAFAH1B2P68402 229 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 FANCD2OSQ96PS1 177 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 GNB1LQ9BYB4 327 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 ISLRO14498 428 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 PYYP10082 97 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 PSG1P11464 419 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 ADMP35318 185 aa17.13■□□□□ 0.33
PDLIM2-216ENST00000464275 GGTLC3B5MD39 225 aa17.12■□□□□ 0.33
PDLIM2-216ENST00000464275 EGR2P11161 476 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-216ENST00000464275 CRYBB3P26998 211 aa17.12■□□□□ 0.33
PDLIM2-216ENST00000464275 TAS2R60P59551 318 aa17.12■□□□□ 0.33
PDLIM2-216ENST00000464275 SUMO1P63165 101 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-216ENST00000464275 KLF17Q5JT82 389 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-216ENST00000464275 LINC00469Q8N7U9 141 aa17.12■□□□□ 0.33
PDLIM2-216ENST00000464275 HNF1AP20823 631 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 FXYD5Q96DB9 178 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 THYN1Q9P016 225 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 HIGD1AQ9Y241 93 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 FLNCQ14315 2725 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 TRAV30A0A087WSZ9 112 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 A8MWP6 167 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 IGKV1-17P01599 117 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 RANP62826 216 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 NRGNQ92686 78 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 ZNF48Q96MX3 618 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 MRPL18Q9H0U6 180 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 ABCA1O95477 2261 aa17.11■□□□□ 0.33
PDLIM2-216ENST00000464275 MSMBP08118 114 aa17.1■□□□□ 0.33
PDLIM2-216ENST00000464275 MFAP4P55083 255 aa17.1■□□□□ 0.33
PDLIM2-216ENST00000464275 LYZP61626 148 aa17.1■□□□□ 0.33
PDLIM2-216ENST00000464275 Q0VG73 95 aa17.1■□□□□ 0.33
PDLIM2-216ENST00000464275 CMTM2Q8TAZ6 248 aa17.1■□□□□ 0.33
PDLIM2-216ENST00000464275 PRO1933Q9H354 126 aa17.1■□□□□ 0.33
PDLIM2-216ENST00000464275 TRAV40A0A0B4J280 105 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 ZNF705GA8MUZ8 300 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 SLC25A16P16260 332 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 TPPP2P59282 170 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 ZNF664Q8N3J9 261 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 CDC42EP3Q9UKI2 254 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 IGHV3OR16-10A0A075B7F0 116 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 SLC17A3O00476 420 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 TOMM40O96008 361 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 CRISP2P16562 243 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 RAB4BP61018 213 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 HSPB9Q9BQS6 159 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 NDUFAF3Q9BU61 184 aa17.09■□□□□ 0.33
PDLIM2-216ENST00000464275 A1L4Q6 167 aa17.08■□□□□ 0.33
PDLIM2-216ENST00000464275 IGF2BP2-AS1Q96M15 143 aa17.08■□□□□ 0.33
PDLIM2-216ENST00000464275 MEGF9Q9H1U4 602 aa17.08■□□□□ 0.33
PDLIM2-216ENST00000464275 ZFYVE26Q68DK2 2539 aa17.08■□□□□ 0.33
PDLIM2-216ENST00000464275 GNG7O60262 68 aa17.08■□□□□ 0.32
PDLIM2-216ENST00000464275 CBLN1P23435 193 aa17.08■□□□□ 0.32
PDLIM2-216ENST00000464275 FAM110DQ8TAY7 271 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-216ENST00000464275 MS4A10Q96PG2 267 aa17.08■□□□□ 0.32
PDLIM2-216ENST00000464275 MRPL27Q9P0M9 148 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-216ENST00000464275 B4DSR2 109 aa17.07■□□□□ 0.32
PDLIM2-216ENST00000464275 TMEM256Q8N2U0 113 aa17.07■□□□□ 0.32
PDLIM2-216ENST00000464275 ZNF329Q86UD4 541 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 SLC25A39Q9BZJ4 359 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 C7orf69Q9H7B7 122 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 C21orf62Q9NYP8 219 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 SNURFLB1AK76 121 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 NDUFB8O95169 186 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 GP9P14770 177 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 UNQ5815/PRO19632Q6UWF5 114 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 BRD3OSQ6XYD6 125 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 OR8I2Q8N0Y5 310 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 C5orf56Q8N8D9 126 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 TMEM68Q96MH6 324 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 CHRDL1Q9BU40 450 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 ZNF462Q96JM2 2506 aa17.06■□□□□ 0.32
PDLIM2-216ENST00000464275 NBEAP1P0C6P0 100 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 KLK9Q2XQG4 91 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 IBA57Q5T440 356 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 RASL11AQ6T310 242 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 FAM231DQ6ZW35 169 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 TMEM14CQ9P0S9 112 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 NAGKQ9UJ70 344 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 KLK9Q9UKQ9 250 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 MOB4Q9Y3A3 225 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 MYO18BQ8IUG5 2567 aa17.05■□□□□ 0.32
PDLIM2-216ENST00000464275 SMIM27A0A1W2PRY6 76 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 ATP6V0E1O15342 81 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 OR2J3O76001 311 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 IGLV2-8P01709 118 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 MYCNOSP40205 109 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 IER3P46695 156 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 OR5I1Q13606 314 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 Q56UQ5 140 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 SMIM12Q96EX1 92 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 C2orf88Q9BSF0 95 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 TMUB1Q9BVT8 246 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 S4R3C0 116 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 WI2-2373I1.2A0A1W2PRP0 233 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 SCGB1D1O95968 90 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 HLA-DQA1P01909 254 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 IGHV4-38-2P0DP08 117 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 GATA3P23771 443 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 OR10J3Q5JRS4 329 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms