RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
GYPC-205ENST00000464053 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
GYPC-205ENST00000464053 RBFOX3A6NFN3 312 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 CXorf1O96002 111 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 C8orf88P0DMB2 117 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 LEMD1Q68G75 181 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 TOMM20LQ6UXN7 152 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 RNF152Q8N8N0 203 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 JMJD8Q96S16 334 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 RNF2Q99496 336 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 EIF5A2Q9GZV4 153 aaKnown RBP11.9□□□□□ -0.5
GYPC-205ENST00000464053 ZFAND3Q9H8U3 227 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 CD5P06127 495 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 TCTEX1D4Q5JR98 221 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 OR5AU1Q8NGC0 362 aa11.9□□□□□ -0.5
GYPC-205ENST00000464053 SLC25A39Q9BZJ4 359 aaPredicted RBP11.9□□□□□ -0.5
GYPC-205ENST00000464053 TCF21O43680 179 aa11.89□□□□□ -0.51
GYPC-205ENST00000464053 GCHFRP30047 84 aa11.89□□□□□ -0.51
GYPC-205ENST00000464053 HIST2H2BDQ6DRA6 164 aa11.89□□□□□ -0.51
GYPC-205ENST00000464053 LINC01006Q8NI28 216 aa11.89□□□□□ -0.51
GYPC-205ENST00000464053 C16orf95Q9H693 158 aa11.89□□□□□ -0.51
GYPC-205ENST00000464053 TREM1Q9NP99 234 aa11.89□□□□□ -0.51
GYPC-205ENST00000464053 I3L521 148 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 BMPR1BO00238 502 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 OR7C2O60412 319 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 OR10J4P0C629 311 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 ICAM4Q14773 271 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 KHDC3LQ587J8 217 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 UQCC3Q6UW78 93 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
GYPC-205ENST00000464053 LOC102723971A0A1B0GUV8 181 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 H3BRN7 92 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 PYYP10082 97 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 BCL2P10415 239 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 TAS2R45P59539 299 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 RELQ04864 619 aaPredicted RBP11.88□□□□□ -0.51
GYPC-205ENST00000464053 RXFP4Q8TDU9 374 aa11.88□□□□□ -0.51
GYPC-205ENST00000464053 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
GYPC-205ENST00000464053 CLPSL1A2RUU4 121 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 SNRPCP09234 159 aaKnown RBP11.87□□□□□ -0.51
GYPC-205ENST00000464053 PSMB3P49720 205 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 UBE2G2P60604 165 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 PMS2P11Q13670 270 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 C18orf65Q6ZTR6 163 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 SHANK2-AS3Q9BTD1 123 aa11.87□□□□□ -0.51
GYPC-205ENST00000464053 SETD2Q9BYW2 2564 aaPredicted RBP11.87□□□□□ -0.51
GYPC-205ENST00000464053 PAGE4O60829 102 aa11.86□□□□□ -0.51
GYPC-205ENST00000464053 PEA15Q15121 130 aa11.86□□□□□ -0.51
GYPC-205ENST00000464053 UNQ9165/PRO28630Q6UXU0 137 aa11.86□□□□□ -0.51
GYPC-205ENST00000464053 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
GYPC-205ENST00000464053 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
GYPC-205ENST00000464053 NIPBLQ6KC79 2804 aaeCLIP11.86□□□□□ -0.517e-7■■■■□ 21.5
GYPC-205ENST00000464053 ZNF207O43670 478 aaKnown RBP11.86□□□□□ -0.51
GYPC-205ENST00000464053 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
GYPC-205ENST00000464053 FXYD5Q96DB9 178 aa11.86□□□□□ -0.51
GYPC-205ENST00000464053 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
GYPC-205ENST00000464053 RABAC1Q9UI14 185 aa11.86□□□□□ -0.51
GYPC-205ENST00000464053 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
GYPC-205ENST00000464053 TMEM218A2RU14 115 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 ZNF98A6NK75 572 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 NDUFA7O95182 113 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 IFNA1P01562 189 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
GYPC-205ENST00000464053 GP9P14770 177 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 SUN5Q8TC36 379 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 C20orf24Q9BUV8 137 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 MANBALQ9NQG1 85 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 VAX2Q9UIW0 290 aa11.85□□□□□ -0.51
GYPC-205ENST00000464053 TEP1Q99973 2627 aaKnown RBP11.84□□□□□ -0.51
GYPC-205ENST00000464053 HAX1O00165 279 aa11.84□□□□□ -0.51
GYPC-205ENST00000464053 NDUFA4O00483 81 aa11.84□□□□□ -0.51
GYPC-205ENST00000464053 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
GYPC-205ENST00000464053 PPT1P50897 306 aa11.84□□□□□ -0.51
GYPC-205ENST00000464053 CD81P60033 236 aa11.84□□□□□ -0.51
GYPC-205ENST00000464053 UBE2L3P68036 154 aaKnown RBP11.84□□□□□ -0.51
GYPC-205ENST00000464053 FAM209BQ5JX69 171 aa11.84□□□□□ -0.51
GYPC-205ENST00000464053 APOHP02749 345 aaPredicted RBP11.83□□□□□ -0.51
GYPC-205ENST00000464053 SRP19P09132 144 aaKnown RBP11.83□□□□□ -0.51
GYPC-205ENST00000464053 SFTA3P0C7M3 94 aa11.83□□□□□ -0.51
GYPC-205ENST00000464053 ADCYAP1P18509 176 aa11.83□□□□□ -0.51
GYPC-205ENST00000464053 S100A1P23297 94 aa11.83□□□□□ -0.51
GYPC-205ENST00000464053 C11orf44Q8N8P7 122 aa11.83□□□□□ -0.51
GYPC-205ENST00000464053 TMEM167BQ9NRX6 74 aa11.83□□□□□ -0.51
GYPC-205ENST00000464053 IGHV4OR15-8A0A075B7B6 117 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 IGHV3OR16-13A0A075B7E8 117 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 A0A087WW49 117 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 IGHV3-49A0A0A0MS15 119 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 IGHV3-74A0A0B4J1X5 117 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 H3BTX0 84 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 CD28P10747 220 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 CDX1P47902 265 aaPredicted RBP11.83□□□□□ -0.52
GYPC-205ENST00000464053 ATP5G3P48201 142 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
GYPC-205ENST00000464053 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
GYPC-205ENST00000464053 STXBP6Q8NFX7 210 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms