RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ZNF846Q147U1 533 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 C1orf194Q5T5A4 169 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 PPP1R14BQ96C90 147 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 LINC00052Q96N35 136 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 CIB3Q96Q77 187 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-205ENST00000463818 C1QTNF4Q9BXJ3 329 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 APLNQ9ULZ1 77 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 IGKV1OR2-108A0A075B7D4 117 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 SYNGR2O43760 224 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 HLA-DRB4P13762 266 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 RPP30P78346 268 aaKnown RBP13.61□□□□□ -0.23
SF3A1-205ENST00000463818 ASAH1Q13510 395 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 GGNBP1Q5YKI7 109 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 GSG1LQ6UXU4 331 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 HLA-DRB4X5D2U9 266 aa13.61□□□□□ -0.23
SF3A1-205ENST00000463818 LINC00854A0A1B0GVQ3 168 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 C9orf170A2RU37 121 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 UPK1BO75841 260 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 IGKV3-20P01619 116 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 GDF5OSQ5U4N7 250 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 Q6ZTC4 211 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 C20orf85Q9H1P6 137 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 FLVCR2Q9UPI3 526 aa13.6□□□□□ -0.23
SF3A1-205ENST00000463818 TRAV10A0A0B4J240 114 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 OR4E1P0C645 316 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 PRR20EP86478 221 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 PRR20CP86479 221 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 PRR20DP86480 221 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 PRR20BP86481 221 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 PRR20AP86496 221 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 SPANXN5Q5MJ07 72 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 OR8I2Q8N0Y5 310 aa13.59□□□□□ -0.23
SF3A1-205ENST00000463818 PRSS46E5RG02 174 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 SOCS3O14543 225 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 TCRBP04435 133 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 PSMB3P49720 205 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 FXYD7P58549 80 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 C12orf74Q32Q52 190 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 SAV1Q9H4B6 383 aaPredicted RBP13.58□□□□□ -0.24
SF3A1-205ENST00000463818 CELA1Q9UNI1 258 aa13.58□□□□□ -0.24
SF3A1-205ENST00000463818 CFDP00746 253 aaPredicted RBP13.57□□□□□ -0.24
SF3A1-205ENST00000463818 IFITM3Q01628 133 aa13.57□□□□□ -0.24
SF3A1-205ENST00000463818 ID3Q02535 119 aa13.57□□□□□ -0.24
SF3A1-205ENST00000463818 ZNF767PQ75MW2 155 aa13.57□□□□□ -0.24
SF3A1-205ENST00000463818 COQ8AQ8NI60 647 aa13.57□□□□□ -0.24
SF3A1-205ENST00000463818 STRAPQ9Y3F4 350 aaKnown RBP13.57□□□□□ -0.24
SF3A1-205ENST00000463818 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
SF3A1-205ENST00000463818 ADAP1O75689 374 aa13.56□□□□□ -0.24
SF3A1-205ENST00000463818 ANXA7P20073 488 aaKnown RBP13.56□□□□□ -0.24
SF3A1-205ENST00000463818 GATA2P23769 480 aaPredicted RBP13.56□□□□□ -0.24
SF3A1-205ENST00000463818 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
SF3A1-205ENST00000463818 OR4B1Q8NGF8 309 aa13.56□□□□□ -0.24
SF3A1-205ENST00000463818 MITD1Q8WV92 249 aa13.56□□□□□ -0.24
SF3A1-205ENST00000463818 NEU1Q99519 415 aa13.56□□□□□ -0.24
SF3A1-205ENST00000463818 VPS13DQ5THJ4 4388 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 IGHV4-4A0A075B6R2 117 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 ZNF98A6NK75 572 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 H3BP45 60 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 ISLRO14498 428 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 ORM2P19652 201 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 POLR2GP62487 172 aaKnown RBP eCLIP13.55□□□□□ -0.24
SF3A1-205ENST00000463818 ZNF705AQ6ZN79 300 aaPredicted RBP13.55□□□□□ -0.24
SF3A1-205ENST00000463818 BPIFCQ8NFQ6 507 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 CLUHP3Q96NS8 147 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 RSG1Q9BU20 258 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 SLC45A2Q9UMX9 530 aa13.55□□□□□ -0.24
SF3A1-205ENST00000463818 IGHV3OR16-12A0A075B7B8 117 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 DEFB131BA0A096LNP1 70 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 F6UB75 175 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 GALR1P47211 349 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 PSG9Q00887 426 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 AKR1C1Q04828 323 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 SPATA31B1PQ5VZV4 182 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 MZT2BQ6NZ67 158 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 EBLN2Q6P2I7 272 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 C16orf92Q96LL3 132 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 C17orf77Q96MU5 243 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 RNF126Q9BV68 326 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 SLC25A32Q9H2D1 315 aa13.54□□□□□ -0.24
SF3A1-205ENST00000463818 FAM240BA0A1B0GVZ2 78 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 ZNF705FA8MVS1 300 aaPredicted RBP13.53□□□□□ -0.24
SF3A1-205ENST00000463818 ZNF705DP0CH99 300 aaPredicted RBP13.53□□□□□ -0.24
SF3A1-205ENST00000463818 ZNF705BP0CI00 300 aaPredicted RBP13.53□□□□□ -0.24
SF3A1-205ENST00000463818 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 FAM78BQ5VT40 261 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 ACOT7LQ6ZUV0 252 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 ZNF709Q8N972 641 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 C20orf173Q96LM9 149 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 SLC35B3Q9H1N7 401 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 PSENENQ9NZ42 101 aa13.53□□□□□ -0.24
SF3A1-205ENST00000463818 A0A0J9YX75 114 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 SMIM9A6NGZ8 99 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 IFNA21P01568 189 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 MEOX2P50222 304 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 EMP1P54849 157 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 PAX9P55771 341 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms