RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 SCRT1Q9BWW7 348 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 RNASE2P10153 161 aaKnown RBP10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 C1QL4Q86Z23 238 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 GLMPQ8WWB7 406 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 CYSLTR1Q9Y271 337 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 PMS2P5A8MQ11 134 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 C1orf147Q96MC9 270 aaPredicted RBP10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 MPDZO75970 2070 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 NOTCH4Q99466 2003 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 AKAP6Q13023 2319 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 H3BUX3 64 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 FBLN7Q53RD9 439 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 GTSCR1Q86UQ5 136 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 LINC00469Q8N7U9 141 aa10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 SSBP4Q9BWG4 385 aaPredicted RBP10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 SPTBN1Q01082 2364 aaKnown RBP10.96□□□□□ -0.65
CHRNA4-202ENST00000463705 FAM19A2Q8N3H0 131 aa10.96□□□□□ -0.66
CHRNA4-202ENST00000463705 A0A0G2JRQ6 117 aa10.96□□□□□ -0.66
CHRNA4-202ENST00000463705 SEPSECSQ9HD40 501 aaKnown RBP10.96□□□□□ -0.66
CHRNA4-202ENST00000463705 NTF4P34130 210 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 TMEM219Q86XT9 240 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 RFNGQ9Y644 331 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 UBE2CO00762 179 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 TNFSF13O75888 250 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 DNAL4O96015 105 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 LINC01551Q86U37 167 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 LINC00477Q96M19 166 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 VCX2Q9H322 139 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 ZNF138P52744 262 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 Q6ZRM9 215 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 PIP4P1Q86T03 277 aa10.95□□□□□ -0.66
CHRNA4-202ENST00000463705 NUP210Q8TEM1 1887 aaPredicted RBP10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 IGKV1-6A0A0C4DH72 117 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 DPM2O94777 84 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 FANCMQ8IYD8 2048 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 COLCA2A8K830 154 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 LINC00205P59089 165 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 MRPL16Q9NX20 251 aaKnown RBP10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 IGLV1-44P01699 117 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 RPL15P61313 204 aaKnown RBP10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 CFAP161Q6P656 301 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 SMPXQ9UHP9 88 aa10.94□□□□□ -0.66
CHRNA4-202ENST00000463705 NBL1P41271 181 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 UBE2E1P51965 193 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 PSG3Q16557 428 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 GSN-AS1Q9NRJ2 163 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 MYO7BQ6PIF6 2116 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 POLEQ07864 2286 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 NDUFA3O95167 84 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 ZNF833PQ6ZTB9 187 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 BPESC1Q9GZL8 116 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 LOC102724200A0A096LPH7 203 aaPredicted RBP10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 CNTFRP26992 372 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 TEX36Q5VZQ5 186 aa10.93□□□□□ -0.66
CHRNA4-202ENST00000463705 PDE6HQ13956 83 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 HEATR5AQ86XA9 2040 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 HELZP42694 1942 aaKnown RBP10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 ERVK11-1P61568 191 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 NIT1Q86X76 327 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 SLC25A2Q9BXI2 301 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 LINC00311Q8N616 119 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 SSC4DQ8WTU2 575 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 HEATR1Q9H583 2144 aaKnown RBP10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 KIAA1671Q9BY89 1806 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 SAA4P35542 130 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 DTX2Q86UW9 622 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 RSPO1Q2MKA7 263 aaPredicted RBP10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 BRD3OSQ6XYD6 125 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 ARL6IP6Q8N6S5 226 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 FAM110DQ8TAY7 271 aaPredicted RBP10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 JKAMPQ9P055 326 aa10.92□□□□□ -0.66
CHRNA4-202ENST00000463705 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 CXCL1P09341 107 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 TMEM14BQ9NUH8 114 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 CFHR2P36980 270 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 EMP1P54849 157 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 NSUN5P1Q3KNT7 163 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 ZNF562Q6V9R5 426 aa10.91□□□□□ -0.66
CHRNA4-202ENST00000463705 CHTOPQ9Y3Y2 248 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms