RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 GALR1P47211 349 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 ZNF90Q03938 601 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 SPINK13Q1W4C9 94 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 NMSQ5H8A3 153 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 GPR141Q7Z602 305 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 OR13C8Q8NGS7 320 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 TERB2Q8NHR7 220 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 C20orf173Q96LM9 149 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 U3KQ87 197 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 TEX13DA0A0J9YY54 714 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-204ENST00000463684 GABARAPH6UMI1 98 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 GABARAPO95166 117 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 TNFAIP8O95379 198 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 CD3DP04234 171 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 OR5AC1P0C628 307 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 AZU1P20160 251 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 CNN1P51911 297 aaKnown RBP10.06□□□□□ -0.8
SMC1A-204ENST00000463684 SCGB2B2Q4G0G5 96 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 RNASE12Q5GAN4 147 aaKnown RBP10.06□□□□□ -0.8
SMC1A-204ENST00000463684 SELENOHQ8IZQ5 122 aaKnown RBP10.06□□□□□ -0.8
SMC1A-204ENST00000463684 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 OR11H7Q8NGC8 314 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 GLYATL2Q8WU03 294 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 FRZBQ92765 325 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 GNPNAT1Q96EK6 184 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-204ENST00000463684 UHRF2Q96PU4 802 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 LINC01587Q99440 93 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 KRTAP1-5Q9BYS1 174 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 Q9H521 79 aa10.06□□□□□ -0.8
SMC1A-204ENST00000463684 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-204ENST00000463684 CRXO43186 299 aaPredicted RBP10.05□□□□□ -0.8
SMC1A-204ENST00000463684 ELK1P19419 428 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 TBPP20226 339 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 LSM3P62310 102 aaKnown RBP10.05□□□□□ -0.8
SMC1A-204ENST00000463684 OR5I1Q13606 314 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 GAMTQ14353 236 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 MEF2DQ14814 521 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 LGI3Q8N145 548 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 MARCH1Q8TCQ1 289 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 SLC35E1Q96K37 410 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 RSG1Q9BU20 258 aa10.05□□□□□ -0.8
SMC1A-204ENST00000463684 TIMM8BQ9Y5J9 83 aaPredicted RBP10.05□□□□□ -0.8
SMC1A-204ENST00000463684 PLAC8L1A1L4L8 177 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 EREGO14944 169 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 HTN1P15515 57 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 ZNF182P17025 639 aaPredicted RBP10.04□□□□□ -0.8
SMC1A-204ENST00000463684 GPX4P36969 197 aaPredicted RBP10.04□□□□□ -0.8
SMC1A-204ENST00000463684 OR2F1Q13607 317 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 Q5VSD8 79 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 BAP18Q8IXM2 172 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 C16orf74Q96GX8 76 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 UPK3BQ9BT76 320 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 SLC25A22Q9H936 323 aa10.04□□□□□ -0.8
SMC1A-204ENST00000463684 C14orf166Q9Y224 244 aaKnown RBP10.04□□□□□ -0.8
SMC1A-204ENST00000463684 IGKV1D-37A0A075B6S9 117 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 TRAV12-2A0A075B6T6 113 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 ATP5IP56385 69 aaPredicted RBP10.03□□□□□ -0.8
SMC1A-204ENST00000463684 TAS2R60P59551 318 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 TMEM256Q8N2U0 113 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 RXFP4Q8TDU9 374 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 DTD1Q8TEA8 209 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 ZNF503Q96F45 646 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 NAA60Q9H7X0 242 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 PPP1R14DQ9NXH3 145 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 ZNF586Q9NXT0 402 aa10.03□□□□□ -0.8
SMC1A-204ENST00000463684 TRAV26-1A0A087WT03 109 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 FAM25AB3EWG3 89 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 FAM25CB3EWG5 89 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 FAM25GB3EWG6 89 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 HPGDSO60760 199 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 ADAP1O75689 374 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 M6PRP20645 277 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 ESRGQ1W209 222 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 OR4D10Q8NGI6 311 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 OR1B1Q8NGR6 318 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 OR52I2Q8NH67 350 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 SLC25A32Q9H2D1 315 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 NOP10Q9NPE3 64 aaKnown RBP10.02□□□□□ -0.81
SMC1A-204ENST00000463684 MTFP1Q9UDX5 166 aa10.02□□□□□ -0.81
SMC1A-204ENST00000463684 A0A0J9YY99 117 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 ZNF98A6NK75 572 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 BOLA2-SMG1P6H3BVE0 249 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 RAB3DO95716 219 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 CFDP00746 253 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-204ENST00000463684 S100A7P31151 101 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 XGP55808 180 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 RHOBP62745 196 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 GGNBP1Q5YKI7 109 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 ZNF493Q6ZR52 646 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 TMEM229BQ8NBD8 167 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 GPR82Q96P67 336 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 TRGV9Q99603 122 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms