RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 LGALSLQ3ZCW2 172 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SPANXN5Q5MJ07 72 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 ZFAND6Q6FIF0 208 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 FAM122CQ6P4D5 195 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PRSS54Q6PEW0 395 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM14EPQ6UXP3 125 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM182Q6ZP80 229 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 C9orf62Q8N4C0 152 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM252Q8N6L7 170 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 OR1L8Q8NGR8 309 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 OR5B3Q8NH48 314 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 OR52E5Q8NH55 327 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 VSTM2AQ8TAG5 236 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 DCUN1D4Q92564 292 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 OR5B12Q96R08 314 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SPIN2AQ99865 258 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SPIN2BQ9BPZ2 258 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SMIM3Q9BZL3 60 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 GNB4Q9HAV0 340 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 ZC4H2Q9NQZ6 224 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 CYTL1Q9NRR1 136 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PSENENQ9NZ42 101 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PITPNC1Q9UKF7 332 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 TNFSF18Q9UNG2 199 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF257Q9Y2Q1 563 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 F11RQ9Y624 299 aaKnown RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 CSMD3Q7Z407 3707 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 IGKV1D-37A0A075B6S9 117 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 FAM90A26D6RGX4 464 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 INS-IGF2F8WCM5 200 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 I3L2K1 104 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 ARPC5O15511 151 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SLC25A4P12235 298 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 DEFA4P12838 97 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 NPY1RP25929 384 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PSMB8P28062 276 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 MAS1LP35410 378 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 AP2S1P53680 142 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SEC61BP60468 96 aaKnown RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 DEFB136Q30KP8 78 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 OR8G2PQ6IF36 304 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 ACOT7LQ6ZUV0 252 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 TTC9CQ8N5M4 171 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PINX1Q96BK5 328 aaKnown RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SMIM8Q96KF7 97 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 DUX3Q96PT4 197 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PLEKHA3Q9HB20 300 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 LYRM2Q9NU23 88 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 FBXL17Q9UF56 701 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PAIP2BQ9ULR5 123 aaKnown RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 SELENOKQ9Y6D0 94 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 IGHV3OR16-8A0A075B7F1 116 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 TRBV9A0A0B4J1U6 114 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 IGHV3-35A0A0C4DH35 117 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 A0A1W2PS18 150 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 RBMY1BA6NDE4 496 aaKnown RBP2.71□□□□□ -1.98
SCFD1-204ENST00000463622 RBMY1EA6NEQ0 496 aaKnown RBP2.71□□□□□ -1.98
SCFD1-204ENST00000463622 PPP5D1E7EU14 171 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 ATG12O94817 140 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 MT-CO2P00403 227 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 IFNA10P01566 189 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 IGHG4P01861 327 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 C1QBP02746 253 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 RBMY1DP0C7P1 496 aaKnown RBP2.71□□□□□ -1.98
SCFD1-204ENST00000463622 GATA2P23769 480 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-204ENST00000463622 RPL12P30050 165 aaKnown RBP2.71□□□□□ -1.98
SCFD1-204ENST00000463622 CAV2P51636 162 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 RHOGP84095 191 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 RUNX1Q01196 453 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 CLINT1Q14677 625 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 KLK9Q2XQG4 91 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 AKIRIN2Q53H80 203 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 C2orf83Q53S99 150 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 OR4X2Q8NGF9 303 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 THAP6Q8TBB0 222 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 MYOZ3Q8TDC0 251 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 CHRDL1Q9BU40 450 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 KLK9Q9UKQ9 250 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 HSPB11Q9Y547 144 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 SMAD5-AS1Q9Y6J3 95 aa2.71□□□□□ -1.98
SCFD1-204ENST00000463622 PSMB11A5LHX3 300 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 E5RGE8 158 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 M0QZK8 103 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 PFDN1O60925 122 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 TSC22D2O75157 780 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 CFDP00746 253 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-204ENST00000463622 TRGV3P03979 118 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 P2RY1P47900 373 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 RAB9AP51151 201 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 RND2P52198 227 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 TPPP2P59282 170 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 RPL23AP62750 156 aaKnown RBP2.7□□□□□ -1.98
SCFD1-204ENST00000463622 ZNF90Q03938 601 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 SLC38A11Q08AI6 406 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 GAMTQ14353 236 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 ZFP69Q49AA0 526 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 RPL7L1Q6DKI1 246 aaKnown RBP2.7□□□□□ -1.98
SCFD1-204ENST00000463622 SLC25A24Q6NUK1 477 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 SLC16A13Q7RTY0 426 aa2.7□□□□□ -1.98
SCFD1-204ENST00000463622 ZNF491Q8N8L2 437 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms