RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 IGHV3-53P01767 116 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 BEND2Q8NDZ0 799 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
NUP58-206ENST00000463407 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 GGTLC1Q9BX51 225 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 VCX2Q9H322 139 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 ADARB2-AS1A8MUL3 147 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 A8MXK9 166 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 C1orf122Q6ZSJ8 110 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 EXOC3-AS1Q8N2X6 119 aa10.43□□□□□ -0.74
NUP58-206ENST00000463407 LOC102724200A0A096LPH7 203 aaPredicted RBP10.42□□□□□ -0.74
NUP58-206ENST00000463407 CFHR2P36980 270 aa10.42□□□□□ -0.74
NUP58-206ENST00000463407 FANCMQ8IYD8 2048 aa10.42□□□□□ -0.74
NUP58-206ENST00000463407 WT1P19544 449 aaPredicted RBP10.42□□□□□ -0.74
NUP58-206ENST00000463407 TCF23Q7RTU1 214 aa10.42□□□□□ -0.74
NUP58-206ENST00000463407 SNRNP200O75643 2136 aaKnown RBP10.42□□□□□ -0.74
NUP58-206ENST00000463407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.42□□□□□ -0.74
NUP58-206ENST00000463407 C1QTNF4Q9BXJ3 329 aa10.42□□□□□ -0.74
NUP58-206ENST00000463407 GAGE10A6NGK3 116 aa10.42□□□□□ -0.74
NUP58-206ENST00000463407 OVOL3O00110 214 aa10.42□□□□□ -0.74
NUP58-206ENST00000463407 ATP6V0E1O15342 81 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 TCF21O43680 179 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 CACNA1BQ00975 2339 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 NMSQ5H8A3 153 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 GFI1BQ5VTD9 330 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 PSCAO43653 123 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 EVI2AP22794 236 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 COTL1Q14019 142 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 DOCK8Q8NF50 2099 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 PGPEP1LA6NFU8 196 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 INSP01308 110 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 SRRM4A7MD48 611 aaKnown RBP10.41□□□□□ -0.74
NUP58-206ENST00000463407 WISP1O95388 367 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 DNAL4O96015 105 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 GATA4P43694 442 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 C9orf139Q6ZV77 190 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 JKAMPQ9P055 326 aa10.41□□□□□ -0.74
NUP58-206ENST00000463407 ADMP35318 185 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 OCC1Q8TAD7 63 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 DAZ1Q9NQZ3 744 aaKnown RBP10.4□□□□□ -0.74
NUP58-206ENST00000463407 ETV2O00321 342 aaPredicted RBP10.4□□□□□ -0.74
NUP58-206ENST00000463407 TOMM40O96008 361 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 IGFL4Q6B9Z1 124 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 OSTCQ9NRP0 149 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 ZNF318Q5VUA4 2279 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 ALPK2Q86TB3 2170 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 Q6ZR03 302 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 CNOT1A5YKK6 2376 aaKnown RBP10.4□□□□□ -0.74
NUP58-206ENST00000463407 A0A087WX48 190 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 IGKV1-16P04430 117 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 FAM19A2Q8N3H0 131 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 MBD3L1Q8WWY6 194 aa10.4□□□□□ -0.74
NUP58-206ENST00000463407 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.74
NUP58-206ENST00000463407 CD28P10747 220 aa10.4□□□□□ -0.75
NUP58-206ENST00000463407 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.75
NUP58-206ENST00000463407 FREM3P0C091 2139 aa10.4□□□□□ -0.75
NUP58-206ENST00000463407 KIF26BQ2KJY2 2108 aa10.4□□□□□ -0.75
NUP58-206ENST00000463407 RTTNQ86VV8 2226 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 NUP210Q8TEM1 1887 aaPredicted RBP10.39□□□□□ -0.75
NUP58-206ENST00000463407 SRSF1Q07955 248 aaKnown RBP eCLIP10.39□□□□□ -0.75
NUP58-206ENST00000463407 ESPL1Q14674 2120 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 F2Z2F3 143 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 LCN12Q6JVE5 192 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 MYO7BQ6PIF6 2116 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 Q6ZS49 121 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 GRNP28799 593 aaKnown RBP10.39□□□□□ -0.75
NUP58-206ENST00000463407 DUX4L9Q6RFH8 374 aaPredicted RBP10.39□□□□□ -0.75
NUP58-206ENST00000463407 ZNF138P52744 262 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 C1QL4Q86Z23 238 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 ANAPC1Q9H1A4 1944 aa10.39□□□□□ -0.75
NUP58-206ENST00000463407 ZNF503-AS2A6NEH8 195 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 HOXA3O43365 443 aaPredicted RBP10.38□□□□□ -0.75
NUP58-206ENST00000463407 SCGB1A1P11684 91 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 FGF16O43320 207 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 STAG3L3P0CL85 134 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 DEFB131AP59861 70 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 SLX1AQ9BQ83 275 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 INTS1Q8N201 2190 aaKnown RBP10.38□□□□□ -0.75
NUP58-206ENST00000463407 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
NUP58-206ENST00000463407 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
NUP58-206ENST00000463407 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
NUP58-206ENST00000463407 RBMY1A1P0DJD3 496 aaKnown RBP10.38□□□□□ -0.75
NUP58-206ENST00000463407 RBMY1CP0DJD4 496 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 DDTP30046 118 aa10.38□□□□□ -0.75
NUP58-206ENST00000463407 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 DEFB113Q30KQ7 82 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 TMEM14EPQ6UXP3 125 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 SRSF8Q9BRL6 282 aaKnown RBP10.37□□□□□ -0.75
NUP58-206ENST00000463407 ZNF562Q6V9R5 426 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 C11orf68Q9H3H3 251 aaKnown RBP10.37□□□□□ -0.75
NUP58-206ENST00000463407 E9PQ18 207 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 SNAI2O43623 268 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 CA1P00915 261 aaPredicted RBP10.37□□□□□ -0.75
NUP58-206ENST00000463407 CYTL1Q9NRR1 136 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 TRBV7-9A0A0J9YWB2 115 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 IGLV1-44P01699 117 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 GZMBP10144 247 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 NTF4P34130 210 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms