RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FBXL7Q9UJT9 491 aa10.02□□□□□ -0.8
VAPB-203ENST00000463370 HIST1H2BKO60814 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BJP06899 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 PRB4P10163 310 aaPredicted RBP10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BOP23527 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BBP33778 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BDP58876 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BCP62807 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST2H2BEQ16778 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.02□□□□□ -0.81
VAPB-203ENST00000463370 STXBP6Q8NFX7 210 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 FRZBQ92765 325 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BHQ93079 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 SGK494Q96LW2 274 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BNQ99877 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H2BMQ99879 126 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 CHRDL1Q9BU40 450 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 ZNF586Q9NXT0 402 aa10.02□□□□□ -0.81
VAPB-203ENST00000463370 B4DSR2 109 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 PEX7O00628 323 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 GGCTO75223 188 aaKnown RBP10.01□□□□□ -0.81
VAPB-203ENST00000463370 S100A6P06703 90 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 S100PP25815 95 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 AKR1D1P51857 326 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 LY6EQ16553 131 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
VAPB-203ENST00000463370 ZNF414Q96IQ9 312 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
VAPB-203ENST00000463370 MEGF9Q9H1U4 602 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 NAV2Q8IVL1 2488 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 IGHV3-35A0A0C4DH35 117 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 WI2-2373I1.2A0A1W2PRP0 233 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 PGPA6NDG6 321 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 CTSGP08311 255 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 ADMP35318 185 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 SRP14P37108 136 aaKnown RBP10.01□□□□□ -0.81
VAPB-203ENST00000463370 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 OR10G8Q8NGN5 311 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 C17orf77Q96MU5 243 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 SHANK2-AS3Q9BTD1 123 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 LY96Q9Y6Y9 160 aa10.01□□□□□ -0.81
VAPB-203ENST00000463370 IGHV3OR16-8A0A075B7F1 116 aa10□□□□□ -0.81
VAPB-203ENST00000463370 H3BRN7 92 aa10□□□□□ -0.81
VAPB-203ENST00000463370 ISLRO14498 428 aa10□□□□□ -0.81
VAPB-203ENST00000463370 C15orf32Q32M92 178 aa10□□□□□ -0.81
VAPB-203ENST00000463370 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
VAPB-203ENST00000463370 MS4A10Q96PG2 267 aa10□□□□□ -0.81
VAPB-203ENST00000463370 THYN1Q9P016 225 aa10□□□□□ -0.81
VAPB-203ENST00000463370 RPH3ALQ9UNE2 315 aa10□□□□□ -0.81
VAPB-203ENST00000463370 MOB4Q9Y3A3 225 aa10□□□□□ -0.81
VAPB-203ENST00000463370 APCP25054 2843 aa10□□□□□ -0.81
VAPB-203ENST00000463370 TSPAN9O75954 239 aa10□□□□□ -0.81
VAPB-203ENST00000463370 SLC25A5P05141 298 aaKnown RBP10□□□□□ -0.81
VAPB-203ENST00000463370 TRGC1P0CF51 173 aa10□□□□□ -0.81
VAPB-203ENST00000463370 FCGR2BP31994 310 aaPredicted RBP10□□□□□ -0.81
VAPB-203ENST00000463370 DSCR9P59020 149 aa10□□□□□ -0.81
VAPB-203ENST00000463370 ERVFC1-1P60608 527 aa10□□□□□ -0.81
VAPB-203ENST00000463370 YPEL3P61236 119 aaPredicted RBP10□□□□□ -0.81
VAPB-203ENST00000463370 RHOGP84095 191 aa10□□□□□ -0.81
VAPB-203ENST00000463370 Q9H3A6 140 aa10□□□□□ -0.81
VAPB-203ENST00000463370 SRD5A3Q9H8P0 318 aa10□□□□□ -0.81
VAPB-203ENST00000463370 CDC42EP3Q9UKI2 254 aa10□□□□□ -0.81
VAPB-203ENST00000463370 EPDR1Q9UM22 224 aa10□□□□□ -0.81
VAPB-203ENST00000463370 UBE2CO00762 179 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 V9GYV3 84 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 TRAV30A0A087WSZ9 112 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 TRBV9A0A0B4J1U6 114 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 PPP5D1E7EU14 171 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 H3BUX3 64 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 AP4M1O00189 453 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 PPP1R2P9O14990 202 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 FABP1P07148 127 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 MGST1P10620 155 aaKnown RBP9.99□□□□□ -0.81
VAPB-203ENST00000463370 SLC25A16P16260 332 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
VAPB-203ENST00000463370 MRPS12O15235 138 aaKnown RBP9.98□□□□□ -0.81
VAPB-203ENST00000463370 GCGP01275 180 aa9.98□□□□□ -0.81
VAPB-203ENST00000463370 GPR183P32249 361 aa9.98□□□□□ -0.81
VAPB-203ENST00000463370 NDUFA6P56556 154 aa9.98□□□□□ -0.81
VAPB-203ENST00000463370 KCNIP4Q6PIL6 250 aa9.98□□□□□ -0.81
VAPB-203ENST00000463370 Q6ZS46 218 aa9.98□□□□□ -0.81
VAPB-203ENST00000463370 Q71RC1 249 aaPredicted RBP9.98□□□□□ -0.81
VAPB-203ENST00000463370 ZNF502Q8TBZ5 544 aa9.98□□□□□ -0.81
VAPB-203ENST00000463370 ZNF98A6NK75 572 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H1EP10412 219 aaKnown RBP9.97□□□□□ -0.81
VAPB-203ENST00000463370 CNN1P51911 297 aaKnown RBP9.97□□□□□ -0.81
VAPB-203ENST00000463370 FOXL1Q12952 345 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 C9orf152Q5JTZ5 239 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 CLEC3BP05452 202 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 HIST1H1BP16401 226 aaKnown RBP9.97□□□□□ -0.81
VAPB-203ENST00000463370 TAS2R60P59551 318 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 GFI1BQ5VTD9 330 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 IMMP2LQ96T52 175 aa9.97□□□□□ -0.81
VAPB-203ENST00000463370 TRBV19A0A075B6N1 114 aa9.96□□□□□ -0.81
VAPB-203ENST00000463370 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms